RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 BMP8BP34820 402 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 EHHADHQ08426 723 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 PNOCQ13519 176 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 PRPF4BQ13523 1007 aaKnown RBP11.52□□□□□ -0.57
LRRC28-204ENST00000558172 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 VWCEQ96DN2 955 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 CCDC51Q96ER9 411 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 GDF15Q99988 308 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 KIFC3Q9BVG8 833 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 OSBPL7Q9BZF2 842 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 CCDC113Q9H0I3 377 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 MTIF3Q9H2K0 278 aaKnown RBP11.52□□□□□ -0.57
LRRC28-204ENST00000558172 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 EIF3DO15371 548 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TSPAN1O60635 241 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 CSDE1O75534 798 aaKnown RBP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 GCNT3O95395 438 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 FGFR4P22455 802 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 AMHR2Q16671 573 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 NOTUMQ6P988 496 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 APBB1IPQ7Z5R6 666 aaPredicted RBP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 ZNF507Q8TCN5 953 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TRAIPQ9BWF2 469 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 STRA6Q9BX79 667 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 MRPL4Q9BYD3 311 aaKnown RBP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 NUP62CLQ9H1M0 184 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TMEM206Q9H813 350 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 RGS18Q9NS28 235 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 C1orf112Q9NSG2 853 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TBX20Q9UMR3 447 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 EXOC7Q9UPT5 735 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 PIN4Q9Y237 131 aaKnown RBP11.51□□□□□ -0.57
LRRC28-204ENST00000558172 PCDHA5Q9Y5H7 936 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 CITO14578 2027 aa11.51□□□□□ -0.57
LRRC28-204ENST00000558172 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 ENPP3O14638 875 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 N4BP3O15049 544 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 PPP1R37O75864 691 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 KIF20AO95235 890 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 SKIP12755 728 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 ARF4P18085 180 aaPredicted RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 SARSP49591 514 aaKnown RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 EPHB4P54760 987 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 DSC3Q14574 896 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 SKOR2Q2VWA4 1001 aaPredicted RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 OTOP2Q7RTS6 562 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 MAP4K3Q8IVH8 894 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 ADAM2Q99965 735 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
LRRC28-204ENST00000558172 TMX1Q9H3N1 280 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 KIAA1468Q9P260 1216 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 UBE4BO95155 1302 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
LRRC28-204ENST00000558172 PIGRP01833 764 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 AMHP03971 560 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 MYBP10242 640 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 KCNJ6P48051 423 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 RAB27AP51159 221 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 SNRPFP62306 86 aaKnown RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 STK4Q13043 487 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 CAMK4Q16566 473 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 ZNF658Q5TYW1 1059 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 ATF7IP2Q5U623 682 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 SLC27A1Q6PCB7 646 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 SLC24A5Q71RS6 500 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 RTN4RL1Q86UN2 441 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 TRIML1Q8N9V2 468 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 HPS3Q969F9 1004 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 SYAP1Q96A49 352 aaPredicted RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 BICD1Q96G01 975 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 ACO2Q99798 780 aaKnown RBP11.49□□□□□ -0.57
LRRC28-204ENST00000558172 ADPGKQ9BRR6 497 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 SLC39A2Q9NP94 309 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 TNFSF13BQ9Y275 285 aa11.49□□□□□ -0.57
LRRC28-204ENST00000558172 A0A0U1RQF3 1178 aa11.48□□□□□ -0.57
LRRC28-204ENST00000558172 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms