RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GNAT2P19087 354 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 SCAND1P57086 179 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 ADAM8P78325 824 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 DUSP2Q05923 314 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 USP39Q53GS9 565 aaKnown RBP4.66□□□□□ -1.66
SPG11-206ENST00000558093 RNF219Q5W0B1 726 aaPredicted RBP4.66□□□□□ -1.66
SPG11-206ENST00000558093 MAMDC4Q6UXC1 1216 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 LHFPL2Q6ZUX7 228 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 GGNQ86UU5 652 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 PPP1R14CQ8TAE6 165 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 AUTS2Q8WXX7 1259 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 AHCYL2Q96HN2 611 aaKnown RBP4.66□□□□□ -1.66
SPG11-206ENST00000558093 RAX2Q96IS3 184 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 QRSL1Q9H0R6 528 aaKnown RBP4.66□□□□□ -1.66
SPG11-206ENST00000558093 C14orf119Q9NWQ9 140 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 DPP7Q9UHL4 492 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 WASHC2AQ641Q2 1341 aa4.66□□□□□ -1.66
SPG11-206ENST00000558093 MATN3O15232 486 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 MFAP3LO75121 409 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 PRKD3O94806 890 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 EYA4O95677 639 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 MTHFD2P13995 350 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 ACRV1P26436 265 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 CCT2P78371 535 aaKnown RBP4.65□□□□□ -1.67
SPG11-206ENST00000558093 CDK17Q00537 523 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 CNGB1Q14028 1251 aaPredicted RBP4.65□□□□□ -1.67
SPG11-206ENST00000558093 Q6ZSN1 163 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 GSPT2Q8IYD1 628 aaKnown RBP4.65□□□□□ -1.67
SPG11-206ENST00000558093 THEMISQ8N1K5 641 aaPredicted RBP4.65□□□□□ -1.67
SPG11-206ENST00000558093 COG1Q8WTW3 980 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 MIEF2Q96C03 454 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 PAWRQ96IZ0 340 aaKnown RBP4.65□□□□□ -1.67
SPG11-206ENST00000558093 CSRNP2Q9H175 543 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 VPS11Q9H270 941 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 PRDM12Q9H4Q4 367 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 TMPRSS11EQ9UL52 423 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 ZBTB21Q9ULJ3 1066 aa4.65□□□□□ -1.67
SPG11-206ENST00000558093 LTA4HP09960 611 aaKnown RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 GYPEP15421 78 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 CASRP41180 1078 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 WNT3AP56704 352 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 MEF2AQ02078 507 aaPredicted RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 RNF207Q6ZRF8 634 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 TAS1R1Q7RTX1 841 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 C1orf210Q8IVY1 113 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 CMIPQ8IY22 773 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 ELOA2Q8IYF1 753 aaPredicted RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 MSL3Q8N5Y2 521 aaKnown RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 ZNF512Q96ME7 567 aaPredicted RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 CDC5LQ99459 802 aaKnown RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 FAM126AQ9BYI3 521 aaPredicted RBP4.64□□□□□ -1.67
SPG11-206ENST00000558093 ZNF341Q9BYN7 854 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 VTA1Q9NP79 307 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 DNAJC28Q9NX36 388 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 SBNO2Q9Y2G9 1366 aa4.64□□□□□ -1.67
SPG11-206ENST00000558093 A0A1W2PR48 441 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 STC2O76061 302 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 CANXP27824 592 aaKnown RBP4.63□□□□□ -1.67
SPG11-206ENST00000558093 MAN2A2P49641 1150 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 MRPS9P82933 396 aaKnown RBP4.63□□□□□ -1.67
SPG11-206ENST00000558093 FAM214AQ32MH5 1076 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 TOR2AQ5JU69 321 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 ZNF662Q6ZS27 426 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 DDX42Q86XP3 938 aaKnown RBP eCLIP4.63□□□□□ -1.67
SPG11-206ENST00000558093 LYSMD2Q8IV50 215 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 SLC41A1Q8IVJ1 513 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 AMOTL1Q8IY63 956 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 ZNF480Q8WV37 535 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 LMBR1Q8WVP7 490 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 ATXN2LQ8WWM7 1075 aaKnown RBP4.63□□□□□ -1.67
SPG11-206ENST00000558093 EXTL1Q92935 676 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 PGBD4Q96DM1 585 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 IL17RAQ96F46 866 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 GPR87Q9BY21 358 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 ACE2Q9BYF1 805 aaPredicted RBP4.63□□□□□ -1.67
SPG11-206ENST00000558093 AURKAIP1Q9NWT8 199 aaPredicted RBP4.63□□□□□ -1.67
SPG11-206ENST00000558093 HDAC5Q9UQL6 1122 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 ATP8A1Q9Y2Q0 1164 aa4.63□□□□□ -1.67
SPG11-206ENST00000558093 TMEM127O75204 238 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 AMHP03971 560 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 C6P13671 934 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 GZMKP49863 264 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 SLC5A3P53794 718 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 SRSF2Q01130 221 aaKnown RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 RRP1BQ14684 758 aaKnown RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 UBE3CQ15386 1083 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 SPTY2D1Q68D10 685 aaPredicted RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 FAM180AQ6UWF9 173 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 APBB1IPQ7Z5R6 666 aaPredicted RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 GLB1L3Q8NCI6 653 aaPredicted RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 ST8SIA2Q92186 375 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 PLEKHG4BQ96PX9 1271 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 CPPED1Q9BRF8 314 aaPredicted RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 IFT122Q9HBG6 1241 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 CCM2LQ9NUG4 571 aaPredicted RBP4.62□□□□□ -1.67
SPG11-206ENST00000558093 SLC5A4Q9NY91 659 aa4.62□□□□□ -1.67
SPG11-206ENST00000558093 GOLGA6L6A8MZA4 724 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms