RNA–Protein interactions for RNA: ENST00000557822.5

RORA-206, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-206ENST00000557822 AKAP13Q12802 2813 aa17.28■□□□□ 0.36
RORA-206ENST00000557822 C2CD2LO14523 706 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 B4GALT3O60512 393 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 FSHRP23945 695 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 KIF5BP33176 963 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 ADCY1Q08828 1119 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 FZD5Q13467 585 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 UBE2SQ16763 222 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 SWSAP1Q6NVH7 229 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 EFCAB12Q6NXP0 572 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 ZNF852Q6ZMS4 543 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 ST13P5Q8NFI4 369 aaPredicted RBP17.27■□□□□ 0.36
RORA-206ENST00000557822 LPPQ93052 612 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 FAN1Q9Y2M0 1017 aa17.27■□□□□ 0.36
RORA-206ENST00000557822 COL4A3Q01955 1670 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 LAMA5O15230 3695 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 MYH15Q9Y2K3 1946 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 ERICH2A1L162 156 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 TMEM8BA6NDV4 472 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 C1QTNF9BB2RNN3 333 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 MEIS1O00470 390 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 IFIT3O14879 490 aaKnown RBP17.26■□□□□ 0.35
RORA-206ENST00000557822 GAS2O43903 313 aaKnown RBP17.26■□□□□ 0.35
RORA-206ENST00000557822 C1QTNF9P0C862 333 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 SDSP20132 328 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 GLUD2P49448 558 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 RAB27AP51159 221 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 PRR23BQ6ZRT6 265 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 TPRG1Q6ZUI0 275 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 MAP4K1Q92918 833 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 LY9Q9HBG7 655 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
RORA-206ENST00000557822 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
RORA-206ENST00000557822 NRP1O14786 923 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 DDHD2O94830 711 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 EFEMP2O95967 443 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 FGFR4P22455 802 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 CNR2P34972 360 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 TRDNQ13061 729 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 SIM2Q14190 667 aaPredicted RBP17.25■□□□□ 0.35
RORA-206ENST00000557822 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
RORA-206ENST00000557822 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 GPR65Q8IYL9 337 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 RNF168Q8IYW5 571 aaPredicted RBP17.25■□□□□ 0.35
RORA-206ENST00000557822 PGBD4Q96DM1 585 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 SCLT1Q96NL6 688 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 CHRDQ9H2X0 955 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 SENP2Q9HC62 589 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
RORA-206ENST00000557822 FREM2Q5SZK8 3169 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 HELZ2Q9BYK8 2649 aaKnown RBP17.24■□□□□ 0.35
RORA-206ENST00000557822 MEIS3P2A8K0S8 358 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 TGM5O43548 720 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 SPATA31D3P0C874 917 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 MYBP10242 640 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 DSG1Q02413 1049 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 LILRA6Q6PI73 481 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 SPATA31D4Q6ZUB0 917 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 NIPA1Q7RTP0 329 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 LRRC71Q8N4P6 559 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 NLRP7Q8WX94 980 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 FAM167AQ96KS9 214 aa17.24■□□□□ 0.35
RORA-206ENST00000557822 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
RORA-206ENST00000557822 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
RORA-206ENST00000557822 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.24■□□□□ 0.35
RORA-206ENST00000557822 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
RORA-206ENST00000557822 ZMYND10O75800 440 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 CCR3P51677 355 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
RORA-206ENST00000557822 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 TAS1R1Q7RTX1 841 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
RORA-206ENST00000557822 ZNF687Q8N1G0 1237 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 FGF13Q92913 245 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
RORA-206ENST00000557822 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
RORA-206ENST00000557822 DHX15O43143 795 aaKnown RBP17.22■□□□□ 0.35
RORA-206ENST00000557822 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.356e-11■■■■□ 24.5
RORA-206ENST00000557822 GNAQP50148 359 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 AASDHQ4L235 1098 aaPredicted RBP17.22■□□□□ 0.35
RORA-206ENST00000557822 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
RORA-206ENST00000557822 GRASPQ7Z6J2 395 aaPredicted RBP17.22■□□□□ 0.35
RORA-206ENST00000557822 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
RORA-206ENST00000557822 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 FNIP2Q9P278 1114 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 IGSF10Q6WRI0 2623 aa17.22■□□□□ 0.35
RORA-206ENST00000557822 CNTNAP2Q9UHC6 1331 aa17.21■□□□□ 0.35
RORA-206ENST00000557822 SHISA7A6NL88 538 aa17.21■□□□□ 0.35
RORA-206ENST00000557822 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms