RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 TSHZ1Q6ZSZ6 1077 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 CD302Q8IX05 232 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 KIAA0319LQ8IZA0 1049 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 RNF214Q8ND24 703 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 TOX2Q96NM4 488 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
GABRB3-213ENST00000557765 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 CCDC113Q9H0I3 377 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 FAM124BQ9H5Z6 455 aaPredicted RBP11.5□□□□□ -0.57
GABRB3-213ENST00000557765 AKT3Q9Y243 479 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 TNFSF13BQ9Y275 285 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.57
GABRB3-213ENST00000557765 ITIH6Q6UXX5 1313 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
GABRB3-213ENST00000557765 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 N4BP3O15049 544 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 SLC16A4O15374 487 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TLR3O15455 904 aaKnown RBP11.49□□□□□ -0.57
GABRB3-213ENST00000557765 CLDN3O15551 220 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 ERLIN2O94905 339 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 PGK1P00558 417 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 MYBP10242 640 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 SKIP12755 728 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 KRT13P13646 458 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
GABRB3-213ENST00000557765 FANCCQ00597 558 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 NBPF20Q3BBV1 942 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 DCAF4L1Q3SXM0 396 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-213ENST00000557765 HACE1Q8IYU2 909 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 DUSP9Q99956 384 aaKnown RBP11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TUBGCP2Q9BSJ2 902 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 TRAIPQ9BWF2 469 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
GABRB3-213ENST00000557765 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
GABRB3-213ENST00000557765 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 SFI1A8K8P3 1242 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 LGALS16A8MUM7 142 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 ARVCFO00192 962 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 GPR182O15218 404 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 EXTL3O43909 919 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 EXOC3O60645 756 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 PRPF6O94906 941 aaKnown RBP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 SGPL1O95470 568 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 PRKCBP05771 671 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 MCF2P10911 925 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 CCL5P13501 91 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 PAX3P23760 479 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 MCL1Q07820 350 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 BFSP2Q13515 415 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 NR1I3Q14994 352 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 FAM26DQ5JW98 314 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 TMEM63BQ5T3F8 832 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 CXCL17Q6UXB2 119 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 TRIM59Q8IWR1 403 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 GPD1LQ8N335 351 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 BICD1Q96G01 975 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 CNOT6LQ96LI5 555 aaKnown RBP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 RNF208Q9H0X6 261 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 HSD3B7Q9H2F3 369 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 IFT122Q9HBG6 1241 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 SETD4Q9NVD3 440 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 FBXL5Q9UKA1 691 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.48□□□□□ -0.57
GABRB3-213ENST00000557765 SIP14410 1827 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 KAT6AQ92794 2004 aa11.48□□□□□ -0.57
GABRB3-213ENST00000557765 A0A0B4J269 797 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 A0A1B0GUA9 196 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 CARNS1A5YM72 827 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 SORBS3O60504 671 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 IL18RAPO95256 599 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 DARSP14868 501 aaKnown RBP11.47□□□□□ -0.57
GABRB3-213ENST00000557765 PROZP22891 400 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 HOXD13P35453 343 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 MTIF2P46199 727 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms