RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 RNF169Q8NCN4 708 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 PGBD4Q96DM1 585 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 DRC1Q96MC2 740 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 CDX2Q99626 313 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TIPINQ9BVW5 301 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 OSBPL7Q9BZF2 842 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-223ENST00000557511 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 E9PMD0 336 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 NR1I2O75469 434 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 EOMESO95936 686 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 F13A1P00488 732 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 FGFR4P22455 802 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 CDC25AP30304 524 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 ARL2P36404 184 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 NAMPTP43490 491 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 SMTNP53814 917 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 HTRA4P83105 476 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-223ENST00000557511 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 AMHR2Q16671 573 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 CNNM3Q8NE01 707 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 RSPH1Q8WYR4 309 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 CCDC51Q96ER9 411 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 PLIN2Q99541 437 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 TTYH1Q9H313 450 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-223ENST00000557511 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 ELAC1Q9H777 363 aaKnown RBP9.21□□□□□ -0.94
PSEN1-223ENST00000557511 CERS4Q9HA82 394 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 XPNPEP1Q9NQW7 623 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 KCND2Q9NZV8 630 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 MTUS1Q9ULD2 1270 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 STXBP5LQ9Y2K9 1186 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
PSEN1-223ENST00000557511 ADGRA3Q8IWK6 1321 aa9.21□□□□□ -0.94
PSEN1-223ENST00000557511 A0A0U1RQF3 1178 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 LINC01553A4QN01 128 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CCDC169A6NNP5 214 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 TBKBP1A7MCY6 615 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 C9IYK1 514 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 H0YCG3 227 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 SPTLC2O15270 562 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CSDE1O75534 798 aaKnown RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 DGKIO75912 1065 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 YEATS4O95619 227 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PLA2G4BP0C869 781 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CD46P15529 392 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 LIG1P18858 919 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 NCLP19338 710 aaKnown RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 GLRA2P23416 452 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CTNNB1P35222 781 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 EFNA5P52803 228 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PTENP60484 403 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 ERVK-21P61565 698 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 TAP1Q03518 808 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 DMP1Q13316 513 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CAPSQ13938 189 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 IL17AQ16552 155 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 MAPK6Q16659 721 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PTPROQ16827 1216 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 HYIQ5T013 277 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 RRAGBQ5VZM2 374 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 FAM173BQ6P4H8 233 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 NOTUMQ6P988 496 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CCDC73Q6ZRK6 1079 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 RTN4RL1Q86UN2 441 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 KCNG4Q8TDN1 519 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 ASAP3Q8TDY4 903 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PRIMPOLQ96LW4 560 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 ADPGKQ9BRR6 497 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 MRPL9Q9BYD2 267 aaKnown RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 NFKBIZQ9BYH8 718 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 CSRNP2Q9H175 543 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 C17orf75Q9HAS0 396 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 IFT122Q9HBG6 1241 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PRMT7Q9NVM4 692 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-223ENST00000557511 PCDHB12Q9Y5F1 795 aa9.2□□□□□ -0.94
PSEN1-223ENST00000557511 LCHNA4D1U4 455 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 MGEA5O60502 916 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 PPP6R2O75170 966 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 FAM13AO94988 1023 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms