RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 TRAIPQ9BWF2 469 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 BHMT2Q9H2M3 363 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 TLE6Q9H808 572 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 SPG21Q9NZD8 308 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 PUF60Q9UHX1 559 aaKnown RBP18.35■□□□□ 0.53
VSX1-207ENST00000557285 HES2Q9Y543 173 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
VSX1-207ENST00000557285 NCK2O43639 380 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 TBX10O75333 385 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 OFD1O75665 1012 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 PPM1AP35813 382 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 ALDH7A1P49419 539 aaKnown RBP18.34■□□□□ 0.53
VSX1-207ENST00000557285 AFF1P51825 1210 aaKnown RBP18.34■□□□□ 0.53
VSX1-207ENST00000557285 KRT17Q04695 432 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 UBE3AQ05086 875 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 TMEM132AQ24JP5 1023 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 KRT79Q5XKE5 535 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 AGMOQ6ZNB7 445 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 URGCPQ8TCY9 931 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 BSNDQ8WZ55 320 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 TRIM6Q9C030 488 aaPredicted RBP18.34■□□□□ 0.53
VSX1-207ENST00000557285 RSAD1Q9HA92 442 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 TBC1D13Q9NVG8 400 aa18.34■□□□□ 0.53
VSX1-207ENST00000557285 LAD1O00515 517 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 ZNF623O75123 536 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 POMCP01189 267 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 ITGA4P13612 1032 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 ARF4P18085 180 aaPredicted RBP18.33■□□□□ 0.52
VSX1-207ENST00000557285 CYP11B2P19099 503 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 LTBRP36941 435 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 PDIA5Q14554 519 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 ZBTB8OSQ8IWT0 167 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 SLC39A11Q8N1S5 342 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 IGSF22Q8N9C0 903 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 PLIN2Q99541 437 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 KIFC3Q9BVG8 833 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 NRDE2Q9H7Z3 1164 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 IPPQ9Y573 584 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 NCOR1O75376 2440 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 C5orf42Q9H799 3197 aa18.33■□□□□ 0.52
VSX1-207ENST00000557285 VWA3AA6NCI4 1184 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 E9PMD0 336 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 NPTXRO95502 500 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 AXLP30530 894 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
VSX1-207ENST00000557285 PLCB3Q01970 1234 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 POU5F1BQ06416 359 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 COL19A1Q14993 1142 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 AMHR2Q16671 573 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 CTC1Q2NKJ3 1217 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 ZNF280BQ86YH2 543 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 IFNLR1Q8IU57 520 aaPredicted RBP18.32■□□□□ 0.52
VSX1-207ENST00000557285 SMG8Q8ND04 991 aaKnown RBP18.32■□□□□ 0.52
VSX1-207ENST00000557285 DEPTORQ8TB45 409 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 FAM193BQ96PV7 902 aaPredicted RBP18.32■□□□□ 0.52
VSX1-207ENST00000557285 CSRNP2Q9H175 543 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 BARX2Q9UMQ3 279 aaPredicted RBP18.32■□□□□ 0.52
VSX1-207ENST00000557285 USP20Q9Y2K6 914 aa18.32■□□□□ 0.52
VSX1-207ENST00000557285 GRXCR2A6NFK2 248 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 B4GALT3O60512 393 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 SSBP05455 408 aaKnown RBP eCLIP18.31■□□□□ 0.52
VSX1-207ENST00000557285 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 SSTR3P32745 418 aaPredicted RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 PRPHP41219 470 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 ATP2C1P98194 919 aaPredicted RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 ADAM15Q13444 863 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 LLGL2Q6P1M3 1020 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 MRPL10Q7Z7H8 261 aaKnown RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 TMEM173Q86WV6 379 aaPredicted RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 EFHBQ8N7U6 833 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 TMEM169Q96HH4 297 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 NFKBIZQ9BYH8 718 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
VSX1-207ENST00000557285 DNM3Q9UQ16 869 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 LZTS1Q9Y250 596 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 STK24Q9Y6E0 443 aa18.31■□□□□ 0.52
VSX1-207ENST00000557285 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 FSCN2O14926 492 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 MUTP22033 750 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 AKAP5P24588 427 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 MLH1P40692 756 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 SLC11A1P49279 550 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 CUL4AQ13619 759 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 PCBP1Q15365 356 aaKnown RBP eCLIP18.3■□□□□ 0.52
VSX1-207ENST00000557285 BCL7CQ8WUZ0 217 aaPredicted RBP18.3■□□□□ 0.52
VSX1-207ENST00000557285 AUTS2Q8WXX7 1259 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 CCDC51Q96ER9 411 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 GAD1Q99259 594 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 MMTAG2Q9BU76 263 aaKnown RBP18.3■□□□□ 0.52
VSX1-207ENST00000557285 CD207Q9UJ71 328 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
VSX1-207ENST00000557285 TTLL13PA6NNM8 815 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 DDHD2O94830 711 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 GLP2RO95838 553 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms