RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SKIP12755 728 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 KLRC2P26717 231 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 LAMTOR4Q0VGL1 99 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 ATAT1Q5SQI0 421 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 KIAA1841Q6NSI8 718 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 SLC7A3Q8WY07 619 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 CPB2Q96IY4 423 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
CHD8-211ENST00000556833 LXNQ9BS40 222 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 RSAD1Q9HA92 442 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 DZANK1Q9NVP4 752 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 MYO15AQ9UKN7 3530 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 F8W810 466 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 RAB27AP51159 221 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 CDC42EP1Q00587 391 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 SCRN1Q12765 414 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 PPP2R5CQ13362 524 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 EMC2Q15006 297 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 XKR9Q5GH70 373 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 EARS2Q5JPH6 523 aaKnown RBP16.52■□□□□ 0.24
CHD8-211ENST00000556833 UBXN11Q5T124 520 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 CPLX2Q6PUV4 134 aaKnown RBP16.52■□□□□ 0.24
CHD8-211ENST00000556833 NEK8Q86SG6 692 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 RNF149Q8NC42 400 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
CHD8-211ENST00000556833 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
CHD8-211ENST00000556833 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 PRRX2Q99811 253 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 EIF2AQ9BY44 585 aaKnown RBP16.52■□□□□ 0.24
CHD8-211ENST00000556833 MFSD1Q9H3U5 465 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 HES2Q9Y543 173 aa16.52■□□□□ 0.24
CHD8-211ENST00000556833 A0A087WWV3 80 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 CNPP09543 421 aaKnown RBP16.51■□□□□ 0.23
CHD8-211ENST00000556833 YWHABP31946 246 aaKnown RBP16.51■□□□□ 0.23
CHD8-211ENST00000556833 OR1G1P47890 313 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 AK2P54819 239 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 MOXD1Q6UVY6 613 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 TAS1R1Q7RTX1 841 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 UBALD2Q8IYN6 164 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 HAS1Q92839 578 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
CHD8-211ENST00000556833 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 KCNMB3Q9NPA1 279 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 FAN1Q9Y2M0 1017 aa16.51■□□□□ 0.23
CHD8-211ENST00000556833 NRP1O14786 923 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 ZNF623O75123 536 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 ERLIN2O94905 339 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
CHD8-211ENST00000556833 HOXA11P31270 313 aaPredicted RBP16.5■□□□□ 0.23
CHD8-211ENST00000556833 MLH1P40692 756 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 CLCN4P51793 760 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
CHD8-211ENST00000556833 GLYCTKQ8IVS8 523 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 ST13P5Q8NFI4 369 aaPredicted RBP16.5■□□□□ 0.23
CHD8-211ENST00000556833 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
CHD8-211ENST00000556833 SFXN1Q9H9B4 322 aa16.5■□□□□ 0.23
CHD8-211ENST00000556833 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
CHD8-211ENST00000556833 SPATA31D3P0C874 917 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 ITGA4P13612 1032 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 RFC5P40937 340 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 SCNN1GP51170 649 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 NR5A1Q13285 461 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 GIT2Q14161 759 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 GALNT17Q6IS24 598 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 SPATA31D4Q6ZUB0 917 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 CCDC149Q6ZUS6 474 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
CHD8-211ENST00000556833 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 GAD1Q99259 594 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 MTRQ99707 1265 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 MAN1C1Q9NR34 630 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 MRPL17Q9NRX2 175 aaKnown RBP16.49■□□□□ 0.23
CHD8-211ENST00000556833 MARCH5Q9NX47 278 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 IPPQ9Y573 584 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 IRAK3Q9Y616 596 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 VPS13AQ96RL7 3174 aa16.49■□□□□ 0.23
CHD8-211ENST00000556833 INO80B-WBP1J3KQ70 363 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 ALDH2P05091 517 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 URODP06132 367 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 EPHA7Q15375 998 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 MRPL10Q7Z7H8 261 aaKnown RBP16.48■□□□□ 0.23
CHD8-211ENST00000556833 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms