RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CLDND1Q9NY35 253 aa5.81□□□□□ -1.48
ATXN3-243ENST00000556671 ATP6V0A2Q9Y487 856 aa5.81□□□□□ -1.48
ATXN3-243ENST00000556671 PCDHB4Q9Y5E5 795 aa5.81□□□□□ -1.48
ATXN3-243ENST00000556671 PTPRCP08575 1304 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 RNF123Q5XPI4 1314 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 ZBED9Q6R2W3 1325 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 A0A1W2PQU0 124 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 ANKRD18BA2A2Z9 1011 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 KLRG2A4D1S0 409 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 GRM8O00222 908 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 AGRPO00253 132 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 DDX3XO00571 662 aaKnown RBP eCLIP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 PPIP5K2O43314 1243 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 ALDH1L1O75891 902 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 PLATP00750 562 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 ZNF28P17035 718 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 IGHMBP2P38935 993 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 IARSP41252 1262 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 MAGEA10P43363 369 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 KCNJ4P48050 445 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 IFIT5Q13325 482 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 SF3B3Q15393 1217 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CCDC57Q2TAC2 916 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CRY2Q49AN0 593 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 TBC1D10BQ4KMP7 808 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 LMBR1LQ6UX01 489 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 TTLL11Q8NHH1 800 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 HNRNPLLQ8WVV9 542 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 KCTD13Q8WZ19 329 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CDC5LQ99459 802 aaKnown RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CDIP1Q9H305 208 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 GREM2Q9H772 168 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 SRCAPQ6ZRS2 3230 aa5.8□□□□□ -1.48
ATXN3-243ENST00000556671 IBTKQ9P2D0 1353 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-243ENST00000556671 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 CDHR2Q9BYE9 1310 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 DGKIO75912 1065 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 DDNO94850 711 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 NBPF7P0C2Y1 421 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 CCT4P50991 539 aaKnown RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 GPSM2P81274 684 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 ZXDCQ2QGD7 858 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 BORAQ6PGQ7 559 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 TEPPQ6URK8 271 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 FAM124AQ86V42 546 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 NIM1KQ8IY84 436 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 LGI4Q8N135 537 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 CELF2-AS1Q8N7Q2 184 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 PHOSPHO1Q8TCT1 267 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 GPR101Q96P66 508 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-243ENST00000556671 GPR27Q9NS67 375 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 IGSF5Q9NSI5 407 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 TNNQ9UQP3 1299 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 INVSQ9Y283 1065 aa5.79□□□□□ -1.48
ATXN3-243ENST00000556671 SCN4AP35499 1836 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 DLX3O60479 287 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 TAF5LO75529 589 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 RAD17O75943 681 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 UFL1O94874 794 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 LRG1P02750 347 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 UBTFL1P0CB47 393 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-243ENST00000556671 DNAJA1P31689 397 aaKnown RBP5.78□□□□□ -1.48
ATXN3-243ENST00000556671 PRELPP51888 382 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 ADAM17P78536 824 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 DDR2Q16832 855 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 EPHA10Q5JZY3 1008 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 LDHAL6AQ6ZMR3 332 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 ITPRIPQ8IWB1 547 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 SLC43A3Q8NBI5 491 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 SUCLG2Q96I99 432 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 LCORQ96JN0 433 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-243ENST00000556671 GMLQ99445 158 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 EYA3Q99504 573 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 IER2Q9BTL4 223 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 USP44Q9H0E7 712 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 SMOC1Q9H4F8 434 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 DBNDD1Q9H9R9 158 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 NMRK2Q9NPI5 230 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 ST7Q9NRC1 585 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 SMPD4Q9NXE4 827 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 HSPBP1Q9NZL4 362 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 MYOTQ9UBF9 498 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 RCAN3Q9UKA8 241 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 MYRFQ9Y2G1 1151 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 A0A1B0GUL6 1792 aa5.78□□□□□ -1.48
ATXN3-243ENST00000556671 KIF16BQ96L93 1317 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 SCN9AQ15858 1988 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 GLTPD2A6NH11 291 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 MAFKO60675 156 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 MSCO60682 206 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 VEGFAP15692 232 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-243ENST00000556671 PRAMEF18Q5VWM3 479 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 CYP4F22Q6NT55 531 aa5.77□□□□□ -1.49
ATXN3-243ENST00000556671 RSPO2Q6UXX9 243 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms