RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 TSPAN1O60635 241 aa26.5■■□□□ 1.83
RCCD1-206ENST00000556618 EFCAB14O75071 495 aa26.5■■□□□ 1.83
RCCD1-206ENST00000556618 HOXA11P31270 313 aaPredicted RBP26.5■■□□□ 1.83
RCCD1-206ENST00000556618 PRPF38BQ5VTL8 546 aaKnown RBP26.5■■□□□ 1.83
RCCD1-206ENST00000556618 ZNF720Q7Z2F6 126 aa26.5■■□□□ 1.83
RCCD1-206ENST00000556618 SLC17A8Q8NDX2 589 aa26.5■■□□□ 1.83
RCCD1-206ENST00000556618 LINC01599Q8WXQ3 324 aa26.5■■□□□ 1.83
RCCD1-206ENST00000556618 MRPL44Q9H9J2 332 aaKnown RBP26.5■■□□□ 1.83
RCCD1-206ENST00000556618 PHLPP2Q6ZVD8 1323 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 ACKR2O00590 384 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 B4GALT5O43286 388 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 ZSCAN20P17040 1043 aaPredicted RBP26.49■■□□□ 1.83
RCCD1-206ENST00000556618 SCP2P22307 547 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 MCM4P33991 863 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 EHHADHQ08426 723 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 RASIP1Q5U651 963 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 ADAM2Q99965 735 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 TSPYL2Q9H2G4 693 aaPredicted RBP26.49■■□□□ 1.83
RCCD1-206ENST00000556618 ST6GALNAC4Q9H4F1 302 aa26.49■■□□□ 1.83
RCCD1-206ENST00000556618 CXXC1Q9P0U4 656 aaPredicted RBP26.49■■□□□ 1.83
RCCD1-206ENST00000556618 PIN4Q9Y237 131 aaKnown RBP26.49■■□□□ 1.83
RCCD1-206ENST00000556618 TRIOBPQ9H2D6 2365 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.48■■□□□ 1.83
RCCD1-206ENST00000556618 ZBBXA8MT70 800 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 AXLP30530 894 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 NCBP1Q09161 790 aaKnown RBP26.48■■□□□ 1.83
RCCD1-206ENST00000556618 PNOCQ13519 176 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 RGS18Q9NS28 235 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 HOOK1Q9UJC3 728 aaKnown RBP26.48■■□□□ 1.83
RCCD1-206ENST00000556618 PTPRSQ13332 1948 aa26.48■■□□□ 1.83
RCCD1-206ENST00000556618 TTLL13PA6NNM8 815 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 EDN1P05305 212 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 ARF4P18085 180 aaPredicted RBP26.47■■□□□ 1.83
RCCD1-206ENST00000556618 WDR5P61964 334 aaKnown RBP26.47■■□□□ 1.83
RCCD1-206ENST00000556618 GTF2BQ00403 316 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 PRPF4BQ13523 1007 aaKnown RBP26.47■■□□□ 1.83
RCCD1-206ENST00000556618 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.47■■□□□ 1.83
RCCD1-206ENST00000556618 HPS3Q969F9 1004 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 CPB2Q96IY4 423 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 STRA6Q9BX79 667 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 MTIF3Q9H2K0 278 aaKnown RBP26.47■■□□□ 1.83
RCCD1-206ENST00000556618 USP20Q9Y2K6 914 aa26.47■■□□□ 1.83
RCCD1-206ENST00000556618 RPN1P04843 607 aaKnown RBP26.46■■□□□ 1.83
RCCD1-206ENST00000556618 STRN3Q13033 797 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 KMT5BQ4FZB7 885 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 ZC2HC1CQ53FD0 456 aaPredicted RBP26.46■■□□□ 1.83
RCCD1-206ENST00000556618 RNPC3Q96LT9 517 aaKnown RBP26.46■■□□□ 1.83
RCCD1-206ENST00000556618 FGFBP2Q9BYJ0 223 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 TBX20Q9UMR3 447 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 CNTNAP2Q9UHC6 1331 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 PPP1R37O75864 691 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 ABCD1P33897 745 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 KCNJ6P48051 423 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 FAM26FQ5R3K3 315 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 NT5DC1Q5TFE4 455 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 TDHQ8IZJ6 230 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 GPT2Q8TD30 523 aa26.46■■□□□ 1.83
RCCD1-206ENST00000556618 LAMA3Q16787 3333 aa26.45■■□□□ 1.83
RCCD1-206ENST00000556618 A0A1B0GUA9 196 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 CASP5P51878 434 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 NOTUMQ6P988 496 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 C1orf112Q9NSG2 853 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 EXOC1Q9NV70 894 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 SLC4A7Q9Y6M7 1214 aa26.45■■□□□ 1.82
RCCD1-206ENST00000556618 C9IYK1 514 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 GCNT3O95395 438 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 MYBP10242 640 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 DEFB103AP81534 67 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 TWF2Q6IBS0 349 aaKnown RBP26.44■■□□□ 1.82
RCCD1-206ENST00000556618 SLC24A5Q71RS6 500 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 ERCC4Q92889 916 aaPredicted RBP26.44■■□□□ 1.82
RCCD1-206ENST00000556618 CCDC51Q96ER9 411 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 TRAIPQ9BWF2 469 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 MRPL4Q9BYD3 311 aaKnown RBP26.44■■□□□ 1.82
RCCD1-206ENST00000556618 COLQQ9Y215 455 aaPredicted RBP26.44■■□□□ 1.82
RCCD1-206ENST00000556618 PCDHB13Q9Y5F0 798 aa26.44■■□□□ 1.82
RCCD1-206ENST00000556618 AMHP03971 560 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 FAM189BP81408 668 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 PSMD2Q13200 908 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 ALCAMQ13740 583 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 TMEM132AQ24JP5 1023 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 GLIS3Q8NEA6 775 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 SPATA20Q8TB22 786 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 CCDC47Q96A33 483 aaKnown RBP26.43■■□□□ 1.82
RCCD1-206ENST00000556618 HVCN1Q96D96 273 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 ACO2Q99798 780 aaKnown RBP26.43■■□□□ 1.82
RCCD1-206ENST00000556618 TARS2Q9BW92 718 aaKnown RBP26.43■■□□□ 1.82
RCCD1-206ENST00000556618 PCDHA5Q9Y5H7 936 aa26.43■■□□□ 1.82
RCCD1-206ENST00000556618 RHOBTB3O94955 611 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 KCNB1Q14721 858 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 UBXN11Q5T124 520 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 CDR2LQ86X02 465 aaPredicted RBP26.42■■□□□ 1.82
RCCD1-206ENST00000556618 MAP4K3Q8IVH8 894 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 PDZD7Q9H5P4 517 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 SLC39A2Q9NP94 309 aa26.42■■□□□ 1.82
RCCD1-206ENST00000556618 A0A0U1RQF3 1178 aa26.41■■□□□ 1.82
RCCD1-206ENST00000556618 SMC2O95347 1197 aa26.41■■□□□ 1.82
RCCD1-206ENST00000556618 SARSP49591 514 aaKnown RBP26.41■■□□□ 1.82
RCCD1-206ENST00000556618 ATF7IP2Q5U623 682 aa26.41■■□□□ 1.82
RCCD1-206ENST00000556618 EPM2AIP1Q7L775 607 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms