RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 LRRC43Q8N309 656 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 MCPH1Q8NEM0 835 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 BCL7CQ8WUZ0 217 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 RUSC1Q9BVN2 902 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 NFKBIZQ9BYH8 718 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 IGFLR1Q9H665 355 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 NRDE2Q9H7Z3 1164 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 TBC1D13Q9NVG8 400 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 RNF216Q9NWF9 866 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 COG5Q9UP83 839 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 INPP5FQ9Y2H2 1132 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 HES2Q9Y543 173 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 PCDHB12Q9Y5F1 795 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 CLIC4Q9Y696 253 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 H3BQ06 376 aaPredicted RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 FSCN2O14926 492 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 ERLIN2O94905 339 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 EYA4O95677 639 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 NCLP19338 710 aaKnown RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 RAB27AP51159 221 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 BCAR1P56945 870 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 RBM10P98175 930 aaKnown RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 MAPK7Q13164 816 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 SF3A1Q15459 793 aaKnown RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 TMEM119Q4V9L6 283 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 NOMO2Q5JPE7 1267 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 HYIQ5T013 277 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 RINT1Q6NUQ1 792 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 BRAPQ7Z569 592 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 ZNF280BQ86YH2 543 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 SLC39A11Q8N1S5 342 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 SNX21Q969T3 373 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 INTS4Q96HW7 963 aaKnown RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 ZNF558Q96NG5 402 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 APOL6Q9BWW8 343 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 RAB34Q9BZG1 259 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 CCDC113Q9H0I3 377 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 CSRNP2Q9H175 543 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 FZD8Q9H461 694 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 NXF3Q9H4D5 531 aaKnown RBP8.98□□□□□ -0.97
VTI1B-206ENST00000556461 AAASQ9NRG9 546 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 MIOSQ9NXC5 875 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 DNAJB4Q9UDY4 337 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 DNM3Q9UQ16 869 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 IPPQ9Y573 584 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
VTI1B-206ENST00000556461 TCF20Q9UGU0 1960 aaKnown RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 NPHP3-ACAD11A0A0J9YXS1 232 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 A0A1B0GUA9 196 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PER2O15055 1255 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 HIP1RO75146 1068 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 ZC3H11AO75152 810 aaKnown RBP eCLIP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 TBX10O75333 385 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 DDHD2O94830 711 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 NPTXRO95502 500 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 POMCP01189 267 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 SKIP12755 728 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 LIG1P18858 919 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 AKAP5P24588 427 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 SLC11A1P49279 550 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PTPAQ15257 358 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 CLUL1Q15846 466 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 LEXMQ3ZCV2 418 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 EEF1DP3Q658K8 133 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 ARL6IP4Q66PJ3 421 aaKnown RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 GLB1LQ6UWU2 654 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 EP400NLQ6ZTU2 488 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 C1orf186Q6ZWK4 172 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 CABP7Q86V35 215 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 VN1R2Q8NFZ6 395 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 MRPS27Q92552 414 aaKnown RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PGBD4Q96DM1 585 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PABPC5Q96DU9 382 aaKnown RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 UHRF1Q96T88 793 aaPredicted RBP8.97□□□□□ -0.97
VTI1B-206ENST00000556461 GAD1Q99259 594 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 GBP3Q9H0R5 595 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 CXCL16Q9H2A7 254 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 PDZD7Q9H5P4 517 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 RSAD1Q9HA92 442 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 CLDND1Q9NY35 253 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
VTI1B-206ENST00000556461 ARL5CA6NH57 179 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 HIDE1A8MVS5 230 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 F8W810 466 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 GLP2RO95838 553 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SSBP05455 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PRKCBP05771 671 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 GALTP07902 379 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PLA2G4BP0C869 781 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms