RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 F5H6K3 240 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 MCF2LO15068 1137 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 CYP26A1O43174 497 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 SKOR1P84550 965 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 KLRC3Q07444 240 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 IZUMO3Q5VZ72 239 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 LRRC34Q8IZ02 419 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 C11orf70Q9BRQ4 267 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 DCTN4Q9UJW0 460 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 REXO2Q9Y3B8 237 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 NOD2Q9HC29 1040 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 CLDN3O15551 220 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 PON1P27169 355 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 CARD9Q9H257 536 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
ARHGEF40-207ENST00000556399 TMEM120BA0PK00 339 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 CC2D2BQ6DHV5 1058 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 BARGINQ6ZT62 677 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 KIF2BQ8N4N8 673 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 LXNQ9BS40 222 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 GEMIN8Q9NWZ8 242 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 GOLGA8MH3BSY2 632 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 CYP11B2P19099 503 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZC3H18Q86VM9 953 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 SUGP1Q8IWZ8 645 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 TTC17Q96AE7 1141 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 GDF3Q9NR23 364 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 KCNQ2O43526 872 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 PSMD6Q15008 389 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZC2HC1CQ53FD0 456 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 CALN1Q9BXU9 219 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 CD58P19256 250 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 COMTP21964 271 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 KCNJ1P48048 391 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 KRT39Q6A163 491 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
ARHGEF40-207ENST00000556399 IQANK1A0A1B0GTG1 560 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 SMIM22K7EJ46 135 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 CAND2O75155 1236 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 P4HA1P13674 534 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 BCAP29Q9UHQ4 241 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ANGPTL2Q9UKU9 493 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 PEAK1Q9H792 1746 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 PJA2O43164 708 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 NOL3O60936 208 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 CRKP46108 304 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF354CQ86Y25 554 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 IPO5O00410 1097 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 HAUS5O94927 633 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 SH3BGRP55822 239 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 CDR2Q01850 454 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 STAT4Q14765 748 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 RINT1Q6NUQ1 792 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 USP21Q9UK80 565 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 SLC26A4O43511 780 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 EIF2AK2P19525 551 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ARL1P40616 181 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 ARL4CP56559 192 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 DARS2Q6PI48 645 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 CATSPER3Q86XQ3 398 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAP7D3Q8IWC1 876 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 THAP2Q9H0W7 228 aa16.04■□□□□ 0.16
ARHGEF40-207ENST00000556399 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 MAPK7Q13164 816 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 KCTD6Q8NC69 237 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 ATL2Q8NHH9 583 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 BATF3Q9NR55 127 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 WNT7AO00755 349 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 CDH16O75309 829 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 ITIH2P19823 946 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 RPA1P27694 616 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 GPS1Q13098 491 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 IL17AQ16552 155 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 OSBPL1AQ9BXW6 950 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 ROPN1BQ9BZX4 212 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 ROPN1Q9HAT0 212 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 DAGLAQ9Y4D2 1042 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 TBX3O15119 743 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 SLC8A3P57103 927 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 RHOT1Q8IXI2 618 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 SLC30A5Q8TAD4 765 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms