RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 ANO5Q75V66 913 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 KSR1Q8IVT5 923 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 FAM177A1Q8N128 213 aaPredicted RBP17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 ETNPPLQ8TBG4 499 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 DDX25Q9UHL0 483 aaKnown RBP17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 DMXL1Q9Y485 3027 aa17.3■□□□□ 0.36
SUPT16H-205ENST00000556217 NCOR2Q9Y618 2525 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 MEIS3P2A8K0S8 358 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 CPLX1O14810 134 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 DEXIO95424 95 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 CLCN4P51793 760 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 TDGQ13569 410 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 NONOQ15233 471 aaKnown RBP eCLIP17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 C15orf39Q6ZRI6 1047 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 ZNF280BQ86YH2 543 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 MBOAT7Q96N66 472 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 KLHL5Q96PQ7 755 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 VN1R3Q9BXE9 311 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 IFT122Q9HBG6 1241 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 SSX2IPQ9Y2D8 614 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
SUPT16H-205ENST00000556217 SSBP05455 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 CNPP09543 421 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 QARSP47897 775 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 PLA2G4FQ68DD2 849 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 DGLUCYQ7Z3D6 616 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 MRPL10Q7Z7H8 261 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 FLCNQ8NFG4 579 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 PSPC1Q8WXF1 523 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 UBN1Q9NPG3 1134 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 DPP7Q9UHL4 492 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 FBXL21Q9UKT6 434 aa17.28■□□□□ 0.36
SUPT16H-205ENST00000556217 MED19A0JLT2 244 aaPredicted RBP17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 REC8O95072 547 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 URODP06132 367 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 SRGAP2CP0DJJ0 459 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 RFC5P40937 340 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 PPP2R5CQ13362 524 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 CNNM3Q8NE01 707 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 CEP170P1Q96L14 293 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 IGSF9Q9P2J2 1179 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 DUSP12Q9UNI6 340 aa17.27■□□□□ 0.36
SUPT16H-205ENST00000556217 M0R2N6 131 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 GAS2O43903 313 aaKnown RBP17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 B4GALT3O60512 393 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 DDHD2O94830 711 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 ADH1AP07327 375 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 AOC1P19801 751 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 CMASQ8NFW8 434 aaPredicted RBP17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 STAMQ92783 540 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 RMDN1Q96DB5 314 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 RTP3Q9BQQ7 232 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 KCNK12Q9HB15 430 aa17.26■□□□□ 0.35
SUPT16H-205ENST00000556217 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 NRP1O14786 923 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 ASAP2O43150 1006 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 LILRB3O75022 631 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 ERLIN2O94905 339 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 POMCP01189 267 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 SOD2P04179 222 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 P4HBP07237 508 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 ITGA4P13612 1032 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 AK2P54819 239 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 NPEPPSP55786 919 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 NCBP1Q09161 790 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 INF2Q27J81 1249 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 OTUD6AQ7L8S5 288 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 SEMA4AQ9H3S1 761 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 MAN1C1Q9NR34 630 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
SUPT16H-205ENST00000556217 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 CCDC194A0A1B0GVG4 234 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 EML1O00423 815 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms