RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 CCDC113Q9H0I3 377 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 OLFML3Q9NRN5 406 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 AGPAT5Q9NUQ2 364 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 TBC1D7Q9P0N9 293 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 HOXA11P31270 313 aaPredicted RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 PRPF4BQ13523 1007 aaKnown RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 AMHR2Q16671 573 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 TMEM132AQ24JP5 1023 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 ZNF720Q7Z2F6 126 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 RTN4RL1Q86UN2 441 aaPredicted RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 ELOA2Q8IYF1 753 aaPredicted RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 TDHQ8IZJ6 230 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 PRO3102Q9H379 93 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 RGS18Q9NS28 235 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 CXXC1Q9P0U4 656 aaPredicted RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 SLC4A7Q9Y6M7 1214 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 MGEA5O60502 916 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 DPYDQ12882 1025 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 DSC3Q14574 896 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 TWF2Q6IBS0 349 aaKnown RBP15.57■□□□□ 0.08
SNX6-206ENST00000556162 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 C1orf112Q9NSG2 853 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
SNX6-206ENST00000556162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.56■□□□□ 0.08
SNX6-206ENST00000556162 B4GALT5O43286 388 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 AMHP03971 560 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
SNX6-206ENST00000556162 ARF4P18085 180 aaPredicted RBP15.56■□□□□ 0.08
SNX6-206ENST00000556162 GTF2BQ00403 316 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 PNOCQ13519 176 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 RASIP1Q5U651 963 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 NOTUMQ6P988 496 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNX6-206ENST00000556162 SLC24A5Q71RS6 500 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 KCNN1Q92952 543 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 MRPL4Q9BYD3 311 aaKnown RBP15.56■□□□□ 0.08
SNX6-206ENST00000556162 EXOC1Q9NV70 894 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 TBX20Q9UMR3 447 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 MYH11P35749 1972 aa15.56■□□□□ 0.08
SNX6-206ENST00000556162 A0A1B0GUA9 196 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 KLRC4O43908 158 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 GCNT3O95395 438 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 MCM4P33991 863 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 ALCAMQ13740 583 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 KMT5BQ4FZB7 885 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 ZC2HC1CQ53FD0 456 aaPredicted RBP15.55■□□□□ 0.08
SNX6-206ENST00000556162 FAM26FQ5R3K3 315 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 STXBP4Q6ZWJ1 553 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 TAS1R3Q7RTX0 852 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 MYOCDQ8IZQ8 938 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 LINC01599Q8WXQ3 324 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 CCDC51Q96ER9 411 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
SNX6-206ENST00000556162 COLQQ9Y215 455 aaPredicted RBP15.55■□□□□ 0.08
SNX6-206ENST00000556162 CNTNAP2Q9UHC6 1331 aa15.55■□□□□ 0.08
SNX6-206ENST00000556162 SMC2O95347 1197 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 PSMD2Q13200 908 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 NT5DC1Q5TFE4 455 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 PHOSPHO2Q8TCD6 241 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 HPS3Q969F9 1004 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 USP20Q9Y2K6 914 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 LAMA2P24043 3122 aaKnown RBP15.54■□□□□ 0.08
SNX6-206ENST00000556162 A0A0U1RQF3 1178 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 A0A1W2PPC1 479 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 TTLL13PA6NNM8 815 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 C9IYK1 514 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 SKIP12755 728 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 IBSPP21815 317 aaPredicted RBP15.54■□□□□ 0.08
SNX6-206ENST00000556162 DEFB103AP81534 67 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 EHHADHQ08426 723 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 ATF7IP2Q5U623 682 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 HVCN1Q96D96 273 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 BICD1Q96G01 975 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 SLC9A7Q96T83 725 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 ACO2Q99798 780 aaKnown RBP15.54■□□□□ 0.08
SNX6-206ENST00000556162 TRAIPQ9BWF2 469 aa15.54■□□□□ 0.08
SNX6-206ENST00000556162 N4BP3O15049 544 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 UPP2O95045 317 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 EDN1P05305 212 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 MYBP10242 640 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 ATP2A2P16615 1042 aaKnown RBP15.53■□□□□ 0.08
SNX6-206ENST00000556162 SARSP49591 514 aaKnown RBP15.53■□□□□ 0.08
SNX6-206ENST00000556162 RAB27AP51159 221 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 FAM189BP81408 668 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 KCNB1Q14721 858 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 ZPBP2Q6X784 338 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
SNX6-206ENST00000556162 MAP4K3Q8IVH8 894 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 SMARCE1Q969G3 411 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 TOP1MTQ969P6 601 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 GSDMAQ96QA5 445 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 ADPGKQ9BRR6 497 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms