RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
ATXN3-234ENST00000555958 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-234ENST00000555958 PPP1R14CQ8TAE6 165 aa6.61□□□□□ -1.35
ATXN3-234ENST00000555958 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
ATXN3-234ENST00000555958 TCF25Q9BQ70 676 aa6.61□□□□□ -1.35
ATXN3-234ENST00000555958 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
ATXN3-234ENST00000555958 TMPRSS11EQ9UL52 423 aa6.61□□□□□ -1.35
ATXN3-234ENST00000555958 TTBK1Q5TCY1 1321 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 XPAP23025 273 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 MANFP55145 182 aaKnown RBP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 ZXDAP98168 799 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 CMTM4Q8IZR5 234 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-234ENST00000555958 ING3Q9NXR8 418 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 PPP2R3BQ9Y5P8 575 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 SHROOM2Q13796 1616 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 DIP2BQ9P265 1576 aa6.6□□□□□ -1.35
ATXN3-234ENST00000555958 PRG4Q92954 1404 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-234ENST00000555958 CAPN14A8MX76 684 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 LY86O95711 162 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 GPR15P49685 360 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 CCDC62Q6P9F0 684 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 HDGFL2Q7Z4V5 671 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-234ENST00000555958 LYSMD2Q8IV50 215 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.35
ATXN3-234ENST00000555958 PIK3C3Q8NEB9 887 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 RSAD2Q8WXG1 361 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 WNT8AQ9H1J5 351 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 VPS11Q9H270 941 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 HECAQ9UBI9 543 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-234ENST00000555958 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 ADAMTS12P58397 1594 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 HECW2Q9P2P5 1572 aa6.59□□□□□ -1.35
ATXN3-234ENST00000555958 ABCC10Q5T3U5 1492 aa6.59□□□□□ -1.36
ATXN3-234ENST00000555958 NRP2O60462 931 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ULK1O75385 1050 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ALDH1A2O94788 518 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 NPEPPSP55786 919 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 SESN3P58005 492 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 FOXE3Q13461 319 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 PDCD1Q15116 288 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 CT83Q5H943 113 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 RNF207Q6ZRF8 634 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ARL8AQ96BM9 186 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 FDXACB1Q9BRP7 624 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-234ENST00000555958 TMPRSS5Q9H3S3 457 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-234ENST00000555958 GIT1Q9Y2X7 761 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ADGRL1O94910 1474 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 NUP160Q12769 1436 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 ADCY10Q96PN6 1610 aa6.58□□□□□ -1.36
ATXN3-234ENST00000555958 BRINP1O60477 761 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 IGSF3O75054 1194 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 SEC24DO94855 1032 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-234ENST00000555958 ACRV1P26436 265 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 NRG3P56975 720 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 PPARAQ07869 468 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 CCDC178Q5BJE1 867 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 PITRM1Q5JRX3 1037 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 EGFLAMQ63HQ2 1017 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 TAS1R1Q7RTX1 841 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 UNC5BQ8IZJ1 945 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 MIEF2Q96C03 454 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-234ENST00000555958 ZNF341Q9BYN7 854 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 PRDM12Q9H4Q4 367 aa6.57□□□□□ -1.36
ATXN3-234ENST00000555958 APOBEC2Q9Y235 224 aaKnown RBP6.57□□□□□ -1.36
ATXN3-234ENST00000555958 ABCA10Q8WWZ4 1543 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 CYP27B1O15528 508 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 MTSS1O43312 755 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 FSHBP01225 129 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 LPLP06858 475 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 C6P13671 934 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 LGALS4P56470 323 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 MGAT5Q09328 741 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 TRIM25Q14258 630 aaKnown RBP6.56□□□□□ -1.36
ATXN3-234ENST00000555958 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
ATXN3-234ENST00000555958 UGT8Q16880 541 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 CRIP3Q6Q6R5 217 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 SLC41A1Q8IVJ1 513 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 OR14C36Q8NHC7 312 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
ATXN3-234ENST00000555958 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-234ENST00000555958 A0A1W2PR48 441 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 MFAP3LO75121 409 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 CPEP16870 476 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 TACR2P21452 398 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 CNGA1P29973 690 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 SPIDRQ14159 915 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 RRP1BQ14684 758 aaKnown RBP6.55□□□□□ -1.36
ATXN3-234ENST00000555958 STAT4Q14765 748 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms