RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 PTENP60484 403 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 ORC2Q13416 577 aaPredicted RBP17.15■□□□□ 0.34
SNX6-205ENST00000555648 GIT2Q14161 759 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 ZNF174Q15697 407 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 ANKRD54Q6NXT1 300 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 PHF7Q9BWX1 381 aaPredicted RBP17.15■□□□□ 0.34
SNX6-205ENST00000555648 NRDE2Q9H7Z3 1164 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 STK39Q9UEW8 545 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.14■□□□□ 0.33
SNX6-205ENST00000555648 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 PRR33A8MZF0 331 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 ALDH2P05091 517 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 GALTP07902 379 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 OR52Z1P0C646 297 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
SNX6-205ENST00000555648 POU5F1BQ06416 359 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 TTC38Q5R3I4 469 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 CES5AQ6NT32 575 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 TMEM184AQ6ZMB5 413 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 MAEAQ7L5Y9 396 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 MRPL10Q7Z7H8 261 aaKnown RBP17.14■□□□□ 0.33
SNX6-205ENST00000555648 RNF135Q8IUD6 432 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 FAM122AQ96E09 287 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 IGSF21Q96ID5 467 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 RPGRIP1Q96KN7 1286 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 NACC1Q96RE7 527 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 APOL5Q9BWW9 433 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 POLR3FQ9H1D9 316 aaPredicted RBP17.14■□□□□ 0.33
SNX6-205ENST00000555648 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 XPNPEP1Q9NQW7 623 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
SNX6-205ENST00000555648 C2orf71A6NGG8 1288 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 WNT7AO00755 349 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 TSPAN1O60635 241 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 NR1I2O75469 434 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 POMCP01189 267 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
SNX6-205ENST00000555648 HOXA11P31270 313 aaPredicted RBP17.13■□□□□ 0.33
SNX6-205ENST00000555648 ARL2P36404 184 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 AGMOQ6ZNB7 445 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 DDX53Q86TM3 631 aaKnown RBP17.13■□□□□ 0.33
SNX6-205ENST00000555648 MCPH1Q8NEM0 835 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 ASAP3Q8TDY4 903 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
SNX6-205ENST00000555648 MUTYHQ9UIF7 546 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 FAN1Q9Y2M0 1017 aa17.13■□□□□ 0.33
SNX6-205ENST00000555648 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
SNX6-205ENST00000555648 A0A087WWV3 80 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 LRRIQ4A6NIV6 560 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 SLC11A1P49279 550 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 CAPSQ13938 189 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 CBX2Q14781 532 aaPredicted RBP17.12■□□□□ 0.33
SNX6-205ENST00000555648 UBXN11Q5T124 520 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 ZBTB8OSQ8IWT0 167 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 APOL6Q9BWW8 343 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 CSRNP2Q9H175 543 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 IPPQ9Y573 584 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 HCFC2Q9Y5Z7 792 aa17.12■□□□□ 0.33
SNX6-205ENST00000555648 ST18O60284 1047 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 CLASP2O75122 1294 aaKnown RBP17.11■□□□□ 0.33
SNX6-205ENST00000555648 CTSAP10619 480 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 GLRA2P23416 452 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 MBTD1Q05BQ5 628 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
SNX6-205ENST00000555648 ZNF280BQ86YH2 543 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
SNX6-205ENST00000555648 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
SNX6-205ENST00000555648 EMILIN2Q9BXX0 1053 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 NFKBIZQ9BYH8 718 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
SNX6-205ENST00000555648 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
SNX6-205ENST00000555648 KIAA1671Q9BY89 1806 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 MED24O75448 989 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 RPA1P27694 616 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 OR1G1P47890 313 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 ITIH3Q06033 890 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 KCNC3Q14003 757 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 RABEP1Q15276 862 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 SYCE2Q6PIF2 218 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms