RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LRCH2Q5VUJ6 765 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
VRK1-205ENST00000555402 PGM2L1Q6PCE3 622 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 RASSF3Q86WH2 238 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 DLG3Q92796 817 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 OR10A2Q9H208 303 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 GALNT8Q9NY28 637 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 GOLGA8AA7E2F4 631 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 GOLGA8BA8MQT2 603 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 TSPAN6O43657 245 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
VRK1-205ENST00000555402 CD40P25942 277 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 ERVK-21P61565 698 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 FSTL1Q12841 308 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 PIN1Q13526 163 aaPredicted RBP7.08□□□□□ -1.28
VRK1-205ENST00000555402 LRRC41Q15345 812 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 SEC23AQ15436 765 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 CCDC142Q17RM4 750 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 ZNF610Q8N9Z0 462 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 FUBP3Q96I24 572 aaKnown RBP eCLIP7.08□□□□□ -1.28
VRK1-205ENST00000555402 MS4A5Q9H3V2 200 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 AGO3Q9H9G7 860 aaKnown RBP7.08□□□□□ -1.28
VRK1-205ENST00000555402 INCENPQ9NQS7 918 aa7.08□□□□□ -1.28
VRK1-205ENST00000555402 E2F8A0AVK6 867 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 K7ESF4 209 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 SNUPNO95149 360 aaKnown RBP7.07□□□□□ -1.28
VRK1-205ENST00000555402 SCGB1D2O95969 90 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 CFBP00751 764 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 FBLP22087 321 aaKnown RBP7.07□□□□□ -1.28
VRK1-205ENST00000555402 PTGS1P23219 599 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 ADRA1BP35368 520 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 MRE11P49959 708 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 SLC25A3Q00325 362 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 HGFACQ04756 655 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 CRHR2Q13324 411 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 STILQ15468 1287 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 GPR158Q5T848 1215 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 FRMD7Q6ZUT3 714 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 PNMA8AQ86V59 439 aaPredicted RBP7.07□□□□□ -1.28
VRK1-205ENST00000555402 CMIPQ8IY22 773 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 CHPFQ8IZ52 775 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 OR14K1Q8NGZ2 314 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 ERCC4Q92889 916 aaPredicted RBP7.07□□□□□ -1.28
VRK1-205ENST00000555402 TOPORSQ9NS56 1045 aaPredicted RBP7.07□□□□□ -1.28
VRK1-205ENST00000555402 GPRC5BQ9NZH0 403 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
VRK1-205ENST00000555402 PMS2P1A4D2B8 440 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 FOXP2O15409 715 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 SLC26A4O43511 780 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 KDM1AO60341 852 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 MEOX1P50221 254 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 LRRC32Q14392 662 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 CLUL1Q15846 466 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 CSRP2Q16527 193 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 OTOP2Q7RTS6 562 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 CBARPQ8N350 705 aaPredicted RBP7.06□□□□□ -1.28
VRK1-205ENST00000555402 RTF1Q92541 710 aaKnown RBP7.06□□□□□ -1.28
VRK1-205ENST00000555402 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 IP6K2Q9UHH9 426 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 KCNG1Q9UIX4 513 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 LUC7L2Q9Y383 392 aaKnown RBP7.06□□□□□ -1.28
VRK1-205ENST00000555402 MRFAP1Q9Y605 127 aa7.06□□□□□ -1.28
VRK1-205ENST00000555402 LCHNA4D1U4 455 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 C4BPAP04003 597 aaKnown RBP7.05□□□□□ -1.28
VRK1-205ENST00000555402 ZSCAN20P17040 1043 aaPredicted RBP7.05□□□□□ -1.28
VRK1-205ENST00000555402 ESRP1Q6NXG1 681 aaKnown RBP7.05□□□□□ -1.28
VRK1-205ENST00000555402 RTKN2Q8IZC4 609 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 HIPK4Q8NE63 616 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 C1orf162Q8NEQ5 155 aaPredicted RBP7.05□□□□□ -1.28
VRK1-205ENST00000555402 FAXDC2Q96IV6 333 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 MPHOSPH9Q99550 1183 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 MSRAQ9UJ68 235 aa7.05□□□□□ -1.28
VRK1-205ENST00000555402 A0A0G2JNJ9 132 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 MMEP08473 750 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 SDHAP31040 664 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 FNTBP49356 437 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 CD83Q01151 205 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 PCBP2Q15366 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
VRK1-205ENST00000555402 INAVAQ3KP66 663 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 NME9Q86XW9 330 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 MYO1HQ8N1T3 1032 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 GBP4Q96PP9 640 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 BTBD2Q9BX70 525 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 CDH19Q9H159 772 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 Q9UFV3 132 aa7.04□□□□□ -1.28
VRK1-205ENST00000555402 NOB1Q9ULX3 412 aaKnown RBP7.04□□□□□ -1.28
VRK1-205ENST00000555402 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
VRK1-205ENST00000555402 RPS6KA4O75676 772 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 AOAHP28039 575 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 ADCY1Q08828 1119 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 EPHA7Q15375 998 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 C7orf31Q8N865 590 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 GPR150Q8NGU9 434 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 TGFBRAP1Q8WUH2 860 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 JPH3Q8WXH2 748 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms