RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CT47A1Q5JQC4 288 aaPredicted RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 CDKAL1Q5VV42 579 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 CREBRFQ8IUR6 639 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 ABHD8Q96I13 439 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
TDP1-211ENST00000555178 TARS2Q9BW92 718 aaKnown RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 NOC2LQ9Y3T9 749 aaKnown RBP11.82□□□□□ -0.52
TDP1-211ENST00000555178 INO80B-WBP1J3KQ70 363 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 GAS2O43903 313 aaKnown RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 CKBP12277 381 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 TMOD1P28289 359 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 ADSSP30520 456 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 SMTNP53814 917 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 MRPS6P82932 125 aaKnown RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 PTK7Q13308 1070 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 UVSSAQ2YD98 709 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 EEF1DP3Q658K8 133 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 MAP7D2Q96T17 732 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 JPH2Q9BR39 696 aaPredicted RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 INO80BQ9C086 356 aaPredicted RBP11.81□□□□□ -0.52
TDP1-211ENST00000555178 ST6GALNAC4Q9H4F1 302 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 PCIF1Q9H4Z3 704 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 C17orf75Q9HAS0 396 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
TDP1-211ENST00000555178 BICDL2A1A5D9 508 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 K7ERI5 159 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 ZBTB41Q5SVQ8 909 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 APTXQ7Z2E3 356 aaKnown RBP11.8□□□□□ -0.52
TDP1-211ENST00000555178 ANKLE1Q8NAG6 615 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 VWCEQ96DN2 955 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 FAM84AQ96KN4 292 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 CBWD1Q9BRT8 395 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
TDP1-211ENST00000555178 FZD8Q9H461 694 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 CEP290O15078 2479 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 ABLIM1O14639 778 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 ADCY5O95622 1261 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
TDP1-211ENST00000555178 NR2F2P24468 414 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 PPP1R2P41236 205 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 CASP4P49662 377 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 FANCCQ00597 558 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 LRRC63Q05C16 580 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 TAF2Q6P1X5 1199 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 ANKRD33Q7Z3H0 272 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 FAM228AQ86W67 206 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 MAP4K3Q8IVH8 894 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 SYCP3Q8IZU3 236 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 TMEM130Q8N3G9 435 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 SCLYQ96I15 445 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 SCLT1Q96NL6 688 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
TDP1-211ENST00000555178 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 WNT8AQ9H1J5 351 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 AGPAT3Q9NRZ7 376 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 TYW1Q9NV66 732 aaKnown RBP11.8□□□□□ -0.52
TDP1-211ENST00000555178 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 IFNKQ9P0W0 207 aa11.8□□□□□ -0.52
TDP1-211ENST00000555178 UBE4BO95155 1302 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 KCNJ18B7U540 433 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 ASAP2O43150 1006 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 NR3C1P04150 777 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 PRKCBP05771 671 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 GHRP10912 638 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 CYP2C18P33260 490 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CYP2J2P51589 502 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CCL23P55773 120 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 KCNJ12Q14500 433 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 EXOC8Q8IYI6 725 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CNOT6LQ96LI5 555 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 ACCSQ96QU6 501 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TSG101Q99816 390 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 GBP3Q9H0R5 595 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CXCL16Q9H2A7 254 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TAB2Q9NYJ8 693 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TRIM43BA6NCK2 446 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 PDXKO00764 312 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CITO14578 2027 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TSPAN1O60635 241 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 KIF20AO95235 890 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 ARF4P18085 180 aaPredicted RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 EIF4BP23588 611 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 DEKP35659 375 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 WNT7BP56706 349 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 LPIN1Q14693 890 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 KRT31Q15323 416 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TCP11X2Q5H9J9 407 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms