RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 PRMT7Q9NVM4 692 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-217ENST00000555116 ODF2LQ9ULJ1 636 aa15.69■□□□□ 0.1
SHMT2-217ENST00000555116 TTLL13PA6NNM8 815 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 EOMESO95936 686 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 EDN1P05305 212 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 LINC00271P0C7V0 271 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 FGFR1P11362 822 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 PLS3P13797 630 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 STAT6P42226 847 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 RAB27AP51159 221 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 EFNA5P52803 228 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 DMP1Q13316 513 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-217ENST00000555116 E2F4Q16254 413 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 RESP18Q5W5W9 173 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 PDILTQ8N807 584 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 SPIRE2Q8WWL2 714 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 PRIMPOLQ96LW4 560 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 TGS1Q96RS0 853 aaKnown RBP15.68■□□□□ 0.1
SHMT2-217ENST00000555116 CDX2Q99626 313 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-217ENST00000555116 NTPCRQ9BSD7 190 aaKnown RBP15.68■□□□□ 0.1
SHMT2-217ENST00000555116 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 ARHGAP28Q9P2N2 729 aa15.68■□□□□ 0.1
SHMT2-217ENST00000555116 EPOPA6NHQ4 379 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 CCDC169A6NNP5 214 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 PRKCBP05771 671 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 ZNF131P52739 623 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 BTG3Q14201 252 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 MAPK6Q16659 721 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 NOTUMQ6P988 496 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 CLEC17AQ6ZS10 378 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 MRPL10Q7Z7H8 261 aaKnown RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 FIBCD1Q8N539 461 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 PRDM12Q9H4Q4 367 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 KMT5AQ9NQR1 393 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 CNTNAP2Q9UHC6 1331 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 A0A1B0GUA9 196 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 ACKR2O00590 384 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 SKIP12755 728 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 NCBP1Q09161 790 aaKnown RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 PAN2Q504Q3 1202 aaKnown RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 SV2BQ7L1I2 683 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 TAS1R3Q7RTX0 852 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 C17orf80Q9BSJ5 609 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 EIF2AQ9BY44 585 aaKnown RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-217ENST00000555116 TMEM134Q9H6X4 195 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 USP20Q9Y2K6 914 aa15.67■□□□□ 0.1
SHMT2-217ENST00000555116 TRIP11Q15643 1979 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 MYMKA6NI61 221 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 SLC16A4O15374 487 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 HOXA2O43364 376 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 KRT18P05783 430 aaKnown RBP15.66■□□□□ 0.1
SHMT2-217ENST00000555116 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 MYLIPQ8WY64 445 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 CLP1Q92989 425 aaKnown RBP15.66■□□□□ 0.1
SHMT2-217ENST00000555116 LPPQ93052 612 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 CASD1Q96PB1 797 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
SHMT2-217ENST00000555116 MRPL42Q9Y6G3 142 aaKnown RBP15.66■□□□□ 0.1
SHMT2-217ENST00000555116 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
SHMT2-217ENST00000555116 TBKBP1A7MCY6 615 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 MEIS3P2A8K0S8 358 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 K7ERI5 159 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 RFXAPO00287 272 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 FAM13AO94988 1023 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 LIG1P18858 919 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 PRPF4BQ13523 1007 aaKnown RBP15.65■□□□□ 0.1
SHMT2-217ENST00000555116 ADALQ6DHV7 355 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 CDR2LQ86X02 465 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-217ENST00000555116 SMG8Q8ND04 991 aaKnown RBP15.65■□□□□ 0.1
SHMT2-217ENST00000555116 TMEM161BQ8NDZ6 487 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 DNAJC19Q96DA6 116 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 SAMD11Q96NU1 681 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 FAM13BQ9NYF5 915 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 MTUS1Q9ULD2 1270 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 TDRD15B5MCY1 1934 aaKnown RBP15.65■□□□□ 0.1
SHMT2-217ENST00000555116 ATG2AQ2TAZ0 1938 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 MYO7AQ13402 2215 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 NCKAP1LP55160 1127 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 ADGRE1Q14246 886 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 LONRF3Q496Y0 759 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 EPC2Q52LR7 807 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 DYMQ7RTS9 669 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 TMEM192Q8IY95 271 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 DDX12PQ92771 950 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 KCNN1Q92952 543 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 DHX58Q96C10 678 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 CUEDC2Q9H467 287 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 PDZD7Q9H5P4 517 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 PARVGQ9HBI0 331 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 GDPD2Q9HCC8 539 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms