RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 COL1A2P08123 1366 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 CDH23Q9H251 3354 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 E9PMD0 336 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 C22orf31O95567 290 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 CYP2C9P11712 490 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 RARRES1P49788 294 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 CLCN6P51797 869 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 ASIC1P78348 528 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 SCN5AQ14524 2016 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 ZNF484Q5JVG2 852 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 RUFY4Q6ZNE9 571 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 SERINC5Q86VE9 423 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 CREBRFQ8IUR6 639 aa19.03■□□□□ 0.64
SHOX-204ENST00000554971 DUSP9Q99956 384 aaKnown RBP19.03■□□□□ 0.64
SHOX-204ENST00000554971 CTAGE9A4FU28 777 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHOX-204ENST00000554971 TUBBP07437 444 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 DMTNQ08495 405 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 MTHFD1LQ6UB35 978 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 UNC13DQ70J99 1090 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 NACC1Q96RE7 527 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 TUBGCP2Q9BSJ2 902 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 HAUS4Q9H6D7 363 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 LZTFL1Q9NQ48 299 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 PDLIM7Q9NR12 457 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 BLOC1S4Q9NUP1 217 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 TBX21Q9UL17 535 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 MAPK8IP1Q9UQF2 711 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 STK24Q9Y6E0 443 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 MYH11P35749 1972 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 KDM3AQ9Y4C1 1321 aa19.02■□□□□ 0.64
SHOX-204ENST00000554971 A0A1W2PQJ5 194 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 RRN3P2A6NIE6 340 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 KLRC1P26715 233 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 CDK17Q00537 523 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 SRGAP1Q7Z6B7 1085 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 LINC01465Q8N7H1 131 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 LRRN4CLQ8ND94 238 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 CEP170P1Q96L14 293 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 EPN1Q9Y6I3 576 aaPredicted RBP19.02■□□□□ 0.63
SHOX-204ENST00000554971 TANC1Q9C0D5 1861 aa19.02■□□□□ 0.63
SHOX-204ENST00000554971 LTBP2Q14767 1821 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 SZT2Q5T011 3432 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 TRIM49BA6NDI0 452 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 ZRANB2O95218 330 aaKnown RBP eCLIP19.01■□□□□ 0.63
SHOX-204ENST00000554971 ITGB8P26012 769 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 PMS1P54277 932 aaKnown RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 KRT83P78385 493 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 MKRN4PQ13434 485 aaPredicted RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 DRP2Q13474 957 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 MEA1Q16626 185 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 TRIM71Q2Q1W2 868 aaKnown RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 XKR9Q5GH70 373 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 CENPPQ6IPU0 288 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 CCDC170Q8IYT3 715 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 CDK5RAP3Q96JB5 506 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 BHMT2Q9H2M3 363 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 DHX33Q9H6R0 707 aaKnown RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 ANKEF1Q9NU02 776 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 ZNHIT6Q9NWK9 470 aaKnown RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 DBR1Q9UK59 544 aaKnown RBP19.01■□□□□ 0.63
SHOX-204ENST00000554971 UMODL1Q5DID0 1318 aa19.01■□□□□ 0.63
SHOX-204ENST00000554971 IGKV6-21A0A0C4DH24 114 aa19■□□□□ 0.63
SHOX-204ENST00000554971 TTC26A0AVF1 554 aa19■□□□□ 0.63
SHOX-204ENST00000554971 TRIM43BA6NCK2 446 aa19■□□□□ 0.63
SHOX-204ENST00000554971 DCDC2CA8MYV0 355 aa19■□□□□ 0.63
SHOX-204ENST00000554971 CLTBP09497 229 aa19■□□□□ 0.63
SHOX-204ENST00000554971 GNAT1P11488 350 aa19■□□□□ 0.63
SHOX-204ENST00000554971 ZNF569Q5MCW4 686 aa19■□□□□ 0.63
SHOX-204ENST00000554971 EHBP1Q8NDI1 1231 aa19■□□□□ 0.63
SHOX-204ENST00000554971 TRIM43Q96BQ3 446 aaPredicted RBP19■□□□□ 0.63
SHOX-204ENST00000554971 ERGIC2Q96RQ1 377 aa19■□□□□ 0.63
SHOX-204ENST00000554971 NT5C3AQ9H0P0 336 aa19■□□□□ 0.63
SHOX-204ENST00000554971 BMP2KQ9NSY1 1161 aaPredicted RBP19■□□□□ 0.63
SHOX-204ENST00000554971 ZNF446Q9NWS9 450 aa19■□□□□ 0.63
SHOX-204ENST00000554971 MAFO75444 373 aaPredicted RBP19■□□□□ 0.63
SHOX-204ENST00000554971 NDUFA10O95299 355 aa19■□□□□ 0.63
SHOX-204ENST00000554971 ZBED6P86452 979 aa19■□□□□ 0.63
SHOX-204ENST00000554971 STK4Q13043 487 aa19■□□□□ 0.63
SHOX-204ENST00000554971 WHAMMP3Q1A5X7 153 aa19■□□□□ 0.63
SHOX-204ENST00000554971 ANKRD40Q6AI12 368 aa19■□□□□ 0.63
SHOX-204ENST00000554971 OTUD6AQ7L8S5 288 aa19■□□□□ 0.63
SHOX-204ENST00000554971 GUF1Q8N442 669 aaKnown RBP19■□□□□ 0.63
SHOX-204ENST00000554971 LRRC71Q8N4P6 559 aa19■□□□□ 0.63
SHOX-204ENST00000554971 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
SHOX-204ENST00000554971 NAPGQ99747 312 aaPredicted RBP19■□□□□ 0.63
SHOX-204ENST00000554971 XPNPEP1Q9NQW7 623 aa19■□□□□ 0.63
SHOX-204ENST00000554971 PCDHA2Q9Y5H9 948 aa19■□□□□ 0.63
SHOX-204ENST00000554971 LRRC63Q05C16 580 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 TBC1D8BQ0IIM8 1120 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 PTK7Q13308 1070 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 C7orf61Q8IZ16 206 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 DNM3Q9UQ16 869 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 NOD1Q9Y239 953 aa18.99■□□□□ 0.63
SHOX-204ENST00000554971 EYA4O95677 639 aa18.98■□□□□ 0.63
SHOX-204ENST00000554971 ARHGAP25P42331 645 aa18.98■□□□□ 0.63
SHOX-204ENST00000554971 CLCN3P51790 818 aa18.98■□□□□ 0.63
SHOX-204ENST00000554971 SLC12A3P55017 1021 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms