RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ACKR2O00590 384 aa26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 KRT18P05783 430 aaKnown RBP26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 RAD51AP2Q09MP3 1159 aa26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 ZNF598Q86UK7 904 aaKnown RBP26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 CMTR2Q8IYT2 770 aaKnown RBP26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 CHAMP1Q96JM3 812 aa26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 LRRC27Q9C0I9 530 aa26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 FAM105AQ9NUU6 356 aa26.72■■□□□ 1.87
SDR39U1-209ENST00000554947 CNTNAP2Q9UHC6 1331 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 NPHP3-ACAD11A0A0J9YXS1 232 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 LCHNA4D1U4 455 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 PRKCBP05771 671 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 ARF4P18085 180 aaPredicted RBP26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 TAP1Q03518 808 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 DEFB123Q8N688 67 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 CNNM3Q8NE01 707 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 TNMDQ9H2S6 317 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 PARVGQ9HBI0 331 aa26.71■■□□□ 1.87
SDR39U1-209ENST00000554947 A0A1B0GUA9 196 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 A0A1W2PQ27 194 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 A0A1W2PQ64 194 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 A0A1W2PQD8 194 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 LINC01553A4QN01 128 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 SFI1A8K8P3 1242 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 K7ERI5 159 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 FAM13AO94988 1023 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 DDX12PQ92771 950 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 KIFC3Q9BVG8 833 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 KBTBD4Q9NVX7 518 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 CHMP5Q9NZZ3 219 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 KCNH3Q9ULD8 1083 aa26.7■■□□□ 1.86
SDR39U1-209ENST00000554947 CHD9Q3L8U1 2897 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 POLR2DO15514 142 aaKnown RBP26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 TBCAO75347 108 aaKnown RBP26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 ATF7P17544 494 aaPredicted RBP26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 ABCD1P33897 745 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 AMPD3Q01432 767 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 PRPF4BQ13523 1007 aaKnown RBP26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 UBXN11Q5T124 520 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 MRPL10Q7Z7H8 261 aaKnown RBP26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 SLC17A8Q8NDX2 589 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 PGBD4Q96DM1 585 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 SAMD11Q96NU1 681 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 PCDHB2Q9Y5E7 798 aa26.69■■□□□ 1.86
SDR39U1-209ENST00000554947 FAM237AA0A1B0GTK4 181 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 MYMKA6NI61 221 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 N4BP3O15049 544 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 NCKAP1LP55160 1127 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 ERVK-21P61565 698 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 CACNB1Q02641 598 aaPredicted RBP26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 SLC27A1Q6PCB7 646 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 FIBCD1Q8N539 461 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 TMEM161BQ8NDZ6 487 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 DHX58Q96C10 678 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 DNAJC19Q96DA6 116 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 CPB2Q96IY4 423 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 TGS1Q96RS0 853 aaKnown RBP26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 TMEM117Q9H0C3 514 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 MTMR10Q9NXD2 777 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 SEL1LQ9UBV2 794 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 USP25Q9UHP3 1055 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 RWDD3Q9Y3V2 267 aa26.68■■□□□ 1.86
SDR39U1-209ENST00000554947 SLC16A4O15374 487 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 B4GALT5O43286 388 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 ARHGEF15O94989 841 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 BTG3Q14201 252 aaPredicted RBP26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 CNNM4Q6P4Q7 775 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 Q7L0L9 218 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 MYCT1Q8N699 235 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 CLP1Q92989 425 aaKnown RBP26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 RNF19AQ9NV58 838 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 HPSEQ9Y251 543 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 KIAA1671Q9BY89 1806 aa26.67■■□□□ 1.86
SDR39U1-209ENST00000554947 MAPTP10636 758 aaKnown RBP26.66■■□□□ 1.86
SDR39U1-209ENST00000554947 GAP43P17677 238 aa26.66■■□□□ 1.86
SDR39U1-209ENST00000554947 FRMD3A2A2Y4 597 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 TRAK2O60296 914 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 PFKFB1P16118 471 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 DYMQ7RTS9 669 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 TAS1R3Q7RTX0 852 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 ABI1Q8IZP0 508 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 MRPL4Q9BYD3 311 aaKnown RBP26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 ST6GALNAC4Q9H4F1 302 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 GDPD2Q9HCC8 539 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 UBN1Q9NPG3 1134 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 CHD7Q9P2D1 2997 aa26.65■■□□□ 1.86
SDR39U1-209ENST00000554947 ZMYM2Q9UBW7 1377 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 TBKBP1A7MCY6 615 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 FGFR1P11362 822 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 IBSPP21815 317 aaPredicted RBP26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 STRN3Q13033 797 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 GRIN2CQ14957 1233 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 NT5DC1Q5TFE4 455 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 HAUS6Q7Z4H7 955 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 APBB1IPQ7Z5R6 666 aaPredicted RBP26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 FAM178BQ8IXR5 827 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 HACE1Q8IYU2 909 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 CASD1Q96PB1 797 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 FIZ1Q96SL8 496 aa26.64■■□□□ 1.86
SDR39U1-209ENST00000554947 ADPGKQ9BRR6 497 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms