RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 TMEM206Q9H813 350 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 CHST12Q9NRB3 414 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 TBC1D7Q9P0N9 293 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 MAN1B1Q9UKM7 699 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 PADI3Q9ULW8 664 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 TBX20Q9UMR3 447 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 ST3GAL5Q9UNP4 418 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 EXOC7Q9UPT5 735 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 CNTNAP2Q9UHC6 1331 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 PIGRP01833 764 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 MORC3Q14149 939 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 ZPBP2Q6X784 338 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 TAS1R3Q7RTX0 852 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 KIAA0895Q8NCT3 520 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 ERCC4Q92889 916 aaPredicted RBP18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 CCDC51Q96ER9 411 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 ACCSQ96QU6 501 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 LBHD1Q9BQE6 289 aaPredicted RBP18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 MRPL4Q9BYD3 311 aaKnown RBP18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 SLC39A2Q9NP94 309 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 AGPAT5Q9NUQ2 364 aa18.07■□□□□ 0.48
SPTLC2-203ENST00000554901 SIP14410 1827 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 TSPAN1O60635 241 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 MYBP10242 640 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 CD52P31358 61 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 CASP5P51878 434 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 FPGSQ05932 587 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 PRPF4BQ13523 1007 aaKnown RBP18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 MYOCDQ8IZQ8 938 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 GUF1Q8N442 669 aaKnown RBP18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 IL23AQ9NPF7 189 aa18.06■□□□□ 0.48
SPTLC2-203ENST00000554901 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 CSF2RAP15509 400 aa18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 SNRPFP62306 86 aaKnown RBP18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 NFX1Q12986 1120 aaKnown RBP18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 ZC2HC1CQ53FD0 456 aaPredicted RBP18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 SCFD1Q8WVM8 642 aa18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 BADQ92934 168 aa18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
SPTLC2-203ENST00000554901 A0A1B0GUA9 196 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 EFCAB14O75071 495 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 ZSCAN20P17040 1043 aaPredicted RBP18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 HOXA11P31270 313 aaPredicted RBP18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 STIM1Q13586 685 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 NOTUMQ6P988 496 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 DBF4BQ8NFT6 615 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 TRAIPQ9BWF2 469 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 FGFBP2Q9BYJ0 223 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 OSBPL7Q9BZF2 842 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 CGNQ9P2M7 1197 aaKnown RBP18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
SPTLC2-203ENST00000554901 N4BP3O15049 544 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 TOM1L1O75674 476 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 SYN1P17600 705 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ARF4P18085 180 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 FGFR4P22455 802 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 KNOP1Q1ED39 458 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ATF7IP2Q5U623 682 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 APBB1IPQ7Z5R6 666 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 DEFB128Q7Z7B8 93 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 GLIS3Q8NEA6 775 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ACO2Q99798 780 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 PIN4Q9Y237 131 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 GDAQ9Y2T3 454 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 LTBP2Q14767 1821 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 HNRNPDLO14979 420 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ACTN1P12814 892 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 DSC3Q14574 896 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 PSRC1Q6PGN9 363 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 SASS6Q6UVJ0 657 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 SYCP3Q8IZU3 236 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 MLKLQ8NB16 471 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 GOLGA5Q8TBA6 731 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 VWCEQ96DN2 955 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 BICD1Q96G01 975 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 TMX1Q9H3N1 280 aa18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
SPTLC2-203ENST00000554901 ABHD14A-ACY1A0A1B0GW23 586 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 BIN1O00499 593 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 B4GALT5O43286 388 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 BAIAP3O94812 1187 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 BMP6P22004 513 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 PROZP22891 400 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 LIG4P49917 911 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 NLRP12P59046 1061 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 KCNA1Q09470 495 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 IKBKEQ14164 716 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 TMEM132AQ24JP5 1023 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 CT47A1Q5JQC4 288 aaPredicted RBP18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 SLFN12LQ6IEE8 588 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 SLC27A1Q6PCB7 646 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 HS2ST1Q7LGA3 356 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms