RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MTMR1Q13613 665 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 CD302Q8IX05 232 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SUPT20HQ8NEM7 779 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 RIT2Q99578 217 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SLITRK6Q9H5Y7 841 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 MYO1FO00160 1098 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 YWHABP31946 246 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 SOX10P56693 466 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 INTS8Q75QN2 995 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 NOVA2Q9UNW9 492 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 SNX24Q9Y343 169 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 ZNF536O15090 1300 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 CALCAP01258 141 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 SP4Q02446 784 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 KIF22Q14807 665 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 KRT71Q3SY84 523 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 PACS2Q86VP3 889 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 TAAR1Q96RJ0 339 aa16.94■□□□□ 0.3
ARHGEF40-203ENST00000554514 GOLGA6L10A0A0M3HER8 536 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 H0YGN5 161 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 DHX15O43143 795 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 CYP26A1O43174 497 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 ICAM1P05362 532 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 MDH1P40925 334 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 QARSP47897 775 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 MXI1P50539 228 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 PLTPP55058 493 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TMC3Q7Z5M5 1100 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 CBWD2Q8IUF1 395 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 UHMK1Q8TAS1 419 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 C18orf8Q96DM3 657 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 PDGFDQ9GZP0 370 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 AGO4Q9HCK5 861 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 NFS1Q9Y697 457 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 ADRB2P07550 413 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 PLS3P13797 630 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TTC31Q49AM3 519 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 XKR9Q5GH70 373 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 SLC47A2Q86VL8 602 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 PCDHB18PQ96TA0 734 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 STRA6Q9BX79 667 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TMEM206Q9H813 350 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TOPORSQ9NS56 1045 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 ATP9AO75110 1047 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 C1orf220Q5T0J3 134 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 FMO2Q99518 471 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 TMEM117Q9H0C3 514 aa16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-203ENST00000554514 HSD17B4P51659 736 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 PTGISQ16647 500 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 PHLDB2Q86SQ0 1253 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 NOP9Q86U38 636 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 SLC9A9Q8IVB4 645 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 EFCAB13Q8IY85 973 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 CLEC4DQ8WXI8 215 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 EPN3Q9H201 632 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 DAAM1Q9Y4D1 1078 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 MUTP22033 750 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 PTGER2P43116 358 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 TADA2BQ86TJ2 420 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 FAM114A2Q9NRY5 505 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
ARHGEF40-203ENST00000554514 ASNSP08243 561 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 MMEP08473 750 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 COMTP21964 271 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 PTENP60484 403 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 MAGOHP61326 146 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 LRIG3Q6UXM1 1119 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 ATP8B4Q8TF62 1192 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 ZNF473Q8WTR7 871 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 MAGOHBQ96A72 148 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 CARD9Q9H257 536 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 GPC5P78333 572 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 SF3A3Q12874 501 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■□□□□ 9.9
ARHGEF40-203ENST00000554514 EPC2Q52LR7 807 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 RNF187Q5TA31 235 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 NLRP14Q86W24 1093 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 SEMA4DQ92854 862 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms