RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 NGRNQ9NPE2 291 aaKnown RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 PRKAG3Q9UGI9 489 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 PCDHB6Q9Y5E3 794 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 TRIP11Q15643 1979 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 ARHGEF35A5YM69 484 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 TSPAN1O60635 241 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 CSPG5O95196 566 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 IL9P15248 144 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 CYP11B2P19099 503 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 NCLP19338 710 aaKnown RBP9.67□□□□□ -0.86
ACTN1-213ENST00000554508 GTF2F1P35269 517 aaKnown RBP eCLIP9.67□□□□□ -0.86
ACTN1-213ENST00000554508 NDUFV1P49821 464 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 RNASELQ05823 741 aaKnown RBP9.67□□□□□ -0.86
ACTN1-213ENST00000554508 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 NBR1Q14596 966 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 AMHR2Q16671 573 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 LONRF3Q496Y0 759 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 AGMOQ6ZNB7 445 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 ADGRD2Q7Z7M1 963 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 RBM23Q86U06 439 aaKnown RBP9.67□□□□□ -0.86
ACTN1-213ENST00000554508 HACE1Q8IYU2 909 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 SLC39A11Q8N1S5 342 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 TMEM169Q96HH4 297 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 TCF25Q9BQ70 676 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 RSAD1Q9HA92 442 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 ENTPD7Q9NQZ7 604 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 TBC1D13Q9NVG8 400 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 PRMT7Q9NVM4 692 aaPredicted RBP9.67□□□□□ -0.86
ACTN1-213ENST00000554508 STK39Q9UEW8 545 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 CD207Q9UJ71 328 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 INPP5FQ9Y2H2 1132 aa9.67□□□□□ -0.86
ACTN1-213ENST00000554508 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 LRRIQ4A6NIV6 560 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 MEIS3P2A8K0S8 358 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 LINC01565O15544 149 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 MBTPS2O43462 519 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ZC3H11AO75152 810 aaKnown RBP eCLIP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 TBX10O75333 385 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 EYA4O95677 639 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ALDH2P05091 517 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 GALTP07902 379 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 SRGAP2BP0DMP2 458 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ITGA4P13612 1032 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ARF4P18085 180 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 NAMPTP43490 491 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 DLX2Q07687 328 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 SMAD4Q13485 552 aaKnown RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 PPP2R5AQ15172 486 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 SMAD2Q15796 467 aaKnown RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ECM1Q16610 540 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 DUSP6Q16828 381 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 FAM187BQ17R55 369 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 KRT79Q5XKE5 535 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 LARP1BQ659C4 914 aaKnown RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 TMEM184AQ6ZMB5 413 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 MAEAQ7L5Y9 396 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 ZBTB8OSQ8IWT0 167 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 GJD3Q8N144 294 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 SMG8Q8ND04 991 aaKnown RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 SNX29Q8TEQ0 813 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 CPB2Q96IY4 423 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 MSLNLQ96KJ4 702 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 FAM193BQ96PV7 902 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 TMEM175Q9BSA9 504 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 TRIM6Q9C030 488 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-213ENST00000554508 C2orf40Q9H1Z8 148 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 NRDE2Q9H7Z3 1164 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 DNM3Q9UQ16 869 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 IPPQ9Y573 584 aa9.66□□□□□ -0.86
ACTN1-213ENST00000554508 NT5C1B-RDH14C9J2C7 533 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 PER2O15055 1255 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 INPPL1O15357 1258 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 PBX3P40426 434 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 ATP2C1P98194 919 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-213ENST00000554508 COASYQ13057 564 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 GIT2Q14161 759 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.86
ACTN1-213ENST00000554508 CDCA2Q69YH5 1023 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-213ENST00000554508 SLC27A1Q6PCB7 646 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
ACTN1-213ENST00000554508 HSCBQ8IWL3 235 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
ACTN1-213ENST00000554508 KIFAP3Q92845 792 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 IGSF21Q96ID5 467 aa9.65□□□□□ -0.86
ACTN1-213ENST00000554508 IFT74Q96LB3 600 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms