RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SART3Q15020 963 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC144BQ3MJ40 725 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 BBS9Q3SYG4 887 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC178Q5BJE1 867 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 IFIT1BQ5T764 474 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 ZNF574Q6ZN55 896 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 NOL8Q76FK4 1167 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 DPH6Q7L8W6 267 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 ARMC9Q7Z3E5 817 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 SGMS1Q86VZ5 419 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 DGKHQ86XP1 1220 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 SCYL3Q8IZE3 742 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 ACER1Q8TDN7 264 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CLMNQ96JQ2 1002 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 HSPA12BQ96MM6 686 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 TMEM47Q9BQJ4 181 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 GPR62Q9BZJ7 368 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 GBA2Q9HCG7 927 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CABP5Q9NP86 173 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 NYAP2Q9P242 653 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 TPCN1Q9ULQ1 816 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 LIMCH1Q9UPQ0 1083 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 PTPRFP10586 1907 aa7.32□□□□□ -1.24
SCFD1-212ENST00000554486 BAZ2BQ9UIF8 2168 aaKnown RBP7.32□□□□□ -1.24
SCFD1-212ENST00000554486 KLF18A0A0U1RQI7 1052 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ERICH2A1L162 156 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-212ENST00000554486 TOMM70O94826 608 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 TOP1P11387 765 aaKnown RBP7.31□□□□□ -1.24
SCFD1-212ENST00000554486 CD247P20963 164 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 PDIA3P30101 505 aaKnown RBP7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ECE1P42892 770 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 CLCN7P51798 805 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 FKBP1BP68106 108 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ST3GAL1Q11201 340 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 NCAPHQ15003 741 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ANKRD1Q15327 319 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ME3Q16798 604 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 APOA5Q6Q788 366 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 RAB11FIP4Q86YS3 637 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 LRRC47Q8N1G4 583 aaKnown RBP7.31□□□□□ -1.24
SCFD1-212ENST00000554486 TMTC2Q8N394 836 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 MKL1Q969V6 931 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 ASIC4Q96FT7 647 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 MYL10Q9BUA6 226 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 PIF1Q9H611 641 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 GP6Q9HCN6 339 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 STX8Q9UNK0 236 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
SCFD1-212ENST00000554486 RNF114Q9Y508 228 aa7.31□□□□□ -1.24
SCFD1-212ENST00000554486 CCDC69A6NI79 296 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 RXRAP19793 462 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 MCM2P49736 904 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 ZNF445P59923 1031 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 TROAPQ12815 778 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 FSTL1Q12841 308 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 GAB4Q2WGN9 574 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 ZNF792Q3KQV3 632 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 KIAA1755Q5JYT7 1200 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 RASGRP2Q7LDG7 609 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 ANKRD13AQ8IZ07 590 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 C2orf69Q8N8R5 385 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-212ENST00000554486 TMX3Q96JJ7 454 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 OSBPL2Q9H1P3 480 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 KAT14Q9H8E8 782 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 APEX2Q9UBZ4 518 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 KCNH3Q9ULD8 1083 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 TMX2Q9Y320 296 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 AFG3L2Q9Y4W6 797 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 ZHX2Q9Y6X8 837 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 NID2Q14112 1375 aa7.3□□□□□ -1.24
SCFD1-212ENST00000554486 GOLGA8BA8MQT2 603 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 H3BS24 57 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 ZBTB43O43298 467 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SIGLEC6O43699 453 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SUSD5O60279 629 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 PFKFB2O60825 505 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 NDUFB10O96000 172 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SNHG28P0DPA3 235 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CD96P40200 585 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CTSKP43235 329 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 RCAN1P53805 252 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CCT2P78371 535 aaKnown RBP7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SCRN1Q12765 414 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 SPP2Q13103 211 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 STK3Q13188 491 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 GRM4Q14833 912 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
SCFD1-212ENST00000554486 MICU3Q86XE3 530 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms