RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 COL19A1Q14993 1142 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 TCEAL5Q5H9L2 206 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 LRRC55Q6ZSA7 311 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 MRPL10Q7Z7H8 261 aaKnown RBP14.45□□□□□ -0.1
SHMT2-211ENST00000554310 POF1BQ8WVV4 589 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 BSNDQ8WZ55 320 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 LPPQ93052 612 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 PPP2R3CQ969Q6 453 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 CDK5RAP3Q96JB5 506 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 UBE2ZQ9H832 354 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-211ENST00000554310 PRMT7Q9NVM4 692 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-211ENST00000554310 LZTS1Q9Y250 596 aa14.45□□□□□ -0.1
SHMT2-211ENST00000554310 E9PMD0 336 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 NCK2O43639 380 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 ARF4P18085 180 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-211ENST00000554310 NCLP19338 710 aaKnown RBP14.44□□□□□ -0.1
SHMT2-211ENST00000554310 DNAJB1P25685 340 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 PLCB3Q01970 1234 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 TFF2Q03403 129 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 RESTQ13127 1097 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 CAMK1Q14012 370 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 SF3A1Q15459 793 aaKnown RBP14.44□□□□□ -0.1
SHMT2-211ENST00000554310 FAM187BQ17R55 369 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 NOMO2Q5JPE7 1267 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 KCNT2Q6UVM3 1135 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 URGCPQ8TCY9 931 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 IFT74Q96LB3 600 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 COL25A1Q9BXS0 654 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-211ENST00000554310 CSRNP2Q9H175 543 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 RSAD1Q9HA92 442 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 UBN1Q9NPG3 1134 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 TLR9Q9NR96 1032 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 ZMYM2Q9UBW7 1377 aa14.44□□□□□ -0.1
SHMT2-211ENST00000554310 B4GALT5O43286 388 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 STX6O43752 255 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 OFD1O75665 1012 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 LONP1P36776 959 aaKnown RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 EFNA5P52803 228 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 ZRSR1Q15695 479 aaKnown RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 MAPK6Q16659 721 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 SLC27A1Q6PCB7 646 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 AGMOQ6ZNB7 445 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 KCNK18Q7Z418 384 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 SMG8Q8ND04 991 aaKnown RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 PABPC5Q96DU9 382 aaKnown RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 CPB2Q96IY4 423 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 DRC1Q96MC2 740 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 PNMA5Q96PV4 448 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 TIPINQ9BVW5 301 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 EIF2AQ9BY44 585 aaKnown RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 TRIM6Q9C030 488 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-211ENST00000554310 CCDC113Q9H0I3 377 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 FZD8Q9H461 694 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 TBC1D13Q9NVG8 400 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 KCND2Q9NZV8 630 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 MTMR6Q9Y217 621 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 INPP5FQ9Y2H2 1132 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 IPPQ9Y573 584 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 MYH11P35749 1972 aa14.43□□□□□ -0.1
SHMT2-211ENST00000554310 PHLPP2Q6ZVD8 1323 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 A0A1B0GUA9 196 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 FSD2A1L4K1 749 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 MEIS3P2A8K0S8 358 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 INPPL1O15357 1258 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 CSPG5O95196 566 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 PRKCBP05771 671 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 ITGA4P13612 1032 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 GUCY2CP25092 1073 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 UBA7P41226 1012 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 ALDH7A1P49419 539 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 KRT17Q04695 432 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 RNASELQ05823 741 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 DMP1Q13316 513 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 LONRF3Q496Y0 759 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 PDE12Q6L8Q7 609 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 CABP7Q86V35 215 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 SLC39A11Q8N1S5 342 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 CALML4Q96GE6 196 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 C17orf75Q9HAS0 396 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 SPG21Q9NZD8 308 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 KANSL3Q9P2N6 904 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 PUF60Q9UHX1 559 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 TDRD15B5MCY1 1934 aaKnown RBP14.42□□□□□ -0.1
SHMT2-211ENST00000554310 XIRP2A4UGR9 3374 aa14.42□□□□□ -0.1
SHMT2-211ENST00000554310 ACKR2O00590 384 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 N4BP3O15049 544 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 HIP1RO75146 1068 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 ZC3H11AO75152 810 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT2-211ENST00000554310 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
SHMT2-211ENST00000554310 KCNA5P22460 613 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 IRS1P35568 1242 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 PBX3P40426 434 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms