RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 CD69Q07108 199 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
ATXN3-225ENST00000554214 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-225ENST00000554214 PPP1R14CQ8TAE6 165 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 TCF25Q9BQ70 676 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 TMPRSS11EQ9UL52 423 aa6.61□□□□□ -1.35
ATXN3-225ENST00000554214 XPAP23025 273 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-225ENST00000554214 MANFP55145 182 aaKnown RBP6.6□□□□□ -1.35
ATXN3-225ENST00000554214 ZXDAP98168 799 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-225ENST00000554214 CMTM4Q8IZR5 234 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-225ENST00000554214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-225ENST00000554214 ING3Q9NXR8 418 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 PPP2R3BQ9Y5P8 575 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 SHROOM2Q13796 1616 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 DIP2BQ9P265 1576 aa6.6□□□□□ -1.35
ATXN3-225ENST00000554214 PRG4Q92954 1404 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-225ENST00000554214 CAPN14A8MX76 684 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 LY86O95711 162 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 GPR15P49685 360 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 CCDC62Q6P9F0 684 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 HDGFL2Q7Z4V5 671 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-225ENST00000554214 LYSMD2Q8IV50 215 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 C1orf210Q8IVY1 113 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.35
ATXN3-225ENST00000554214 PIK3C3Q8NEB9 887 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 RSAD2Q8WXG1 361 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 WNT8AQ9H1J5 351 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 VPS11Q9H270 941 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 HECAQ9UBI9 543 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-225ENST00000554214 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 ADAMTS12P58397 1594 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 HECW2Q9P2P5 1572 aa6.59□□□□□ -1.35
ATXN3-225ENST00000554214 ABCC10Q5T3U5 1492 aa6.59□□□□□ -1.36
ATXN3-225ENST00000554214 NRP2O60462 931 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ULK1O75385 1050 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ALDH1A2O94788 518 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 NPEPPSP55786 919 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 SESN3P58005 492 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 FOXE3Q13461 319 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 PDCD1Q15116 288 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 CT83Q5H943 113 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 RNF207Q6ZRF8 634 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ARL8AQ96BM9 186 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 FDXACB1Q9BRP7 624 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-225ENST00000554214 TMPRSS5Q9H3S3 457 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-225ENST00000554214 GIT1Q9Y2X7 761 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ADGRL1O94910 1474 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 NUP160Q12769 1436 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 ADCY10Q96PN6 1610 aa6.58□□□□□ -1.36
ATXN3-225ENST00000554214 BRINP1O60477 761 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 IGSF3O75054 1194 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 SEC24DO94855 1032 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-225ENST00000554214 ACRV1P26436 265 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 NRG3P56975 720 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 PPARAQ07869 468 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 CCDC178Q5BJE1 867 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 PITRM1Q5JRX3 1037 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 EGFLAMQ63HQ2 1017 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 TAS1R1Q7RTX1 841 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 UNC5BQ8IZJ1 945 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 MIEF2Q96C03 454 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 EAF2Q96CJ1 260 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-225ENST00000554214 ZNF341Q9BYN7 854 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 PRDM12Q9H4Q4 367 aa6.57□□□□□ -1.36
ATXN3-225ENST00000554214 APOBEC2Q9Y235 224 aaKnown RBP6.57□□□□□ -1.36
ATXN3-225ENST00000554214 ABCA10Q8WWZ4 1543 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 CYP27B1O15528 508 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 MTSS1O43312 755 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 FSHBP01225 129 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 LPLP06858 475 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 C6P13671 934 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 LGALS4P56470 323 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 MGAT5Q09328 741 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 TRIM25Q14258 630 aaKnown RBP6.56□□□□□ -1.36
ATXN3-225ENST00000554214 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
ATXN3-225ENST00000554214 UGT8Q16880 541 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 CRIP3Q6Q6R5 217 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 SLC41A1Q8IVJ1 513 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 OR14C36Q8NHC7 312 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
ATXN3-225ENST00000554214 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-225ENST00000554214 A0A1W2PR48 441 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 MFAP3LO75121 409 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 CPEP16870 476 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 TACR2P21452 398 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 CNGA1P29973 690 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 SPIDRQ14159 915 aa6.55□□□□□ -1.36
ATXN3-225ENST00000554214 RRP1BQ14684 758 aaKnown RBP6.55□□□□□ -1.36
ATXN3-225ENST00000554214 STAT4Q14765 748 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms