RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
CHGA-203ENST00000553866 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 FZD8Q9H461 694 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
CHGA-203ENST00000553866 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 IPPQ9Y573 584 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 MYH15Q9Y2K3 1946 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 SFI1A8K8P3 1242 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 NT5C1B-RDH14C9J2C7 533 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 FGF18O76093 207 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 SKIP12755 728 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 AXLP30530 894 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 NAMPTP43490 491 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 RAB27AP51159 221 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 KCNQ1P51787 676 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 ERVFC1P60507 584 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 HYAL1Q12794 435 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 NOTUMQ6P988 496 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 LRRC43Q8N309 656 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 SYT2Q8N9I0 419 aaPredicted RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 EPSTI1Q96J88 318 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 ASB2Q96Q27 587 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 LMAN2LQ9H0V9 348 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 NXF3Q9H4D5 531 aaKnown RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 NSUN3Q9H649 340 aaKnown RBP13.94□□□□□ -0.18
CHGA-203ENST00000553866 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 TBC1D13Q9NVG8 400 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 MIOSQ9NXC5 875 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 PCDHB12Q9Y5F1 795 aa13.94□□□□□ -0.18
CHGA-203ENST00000553866 TCF20Q9UGU0 1960 aaKnown RBP13.93□□□□□ -0.18
CHGA-203ENST00000553866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.93□□□□□ -0.18
CHGA-203ENST00000553866 A0A1B0GUA9 196 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 DDHD2O94830 711 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 NPTXRO95502 500 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHGA-203ENST00000553866 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 LAG3P18627 525 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 LIG1P18858 919 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 PLCG1P19174 1290 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 PEX3P56589 373 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 BCAR1P56945 870 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 PCBP1Q15365 356 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHGA-203ENST00000553866 FAM187BQ17R55 369 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 EEF1DP3Q658K8 133 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 TAS1R3Q7RTX0 852 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 THNSL1Q8IYQ7 743 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 BCL7CQ8WUZ0 217 aaPredicted RBP13.93□□□□□ -0.18
CHGA-203ENST00000553866 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
CHGA-203ENST00000553866 HLA-CQ95604 372 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 AK8Q96MA6 479 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 APOL6Q9BWW8 343 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 PDZD7Q9H5P4 517 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
CHGA-203ENST00000553866 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
CHGA-203ENST00000553866 CNTNAP2Q9UHC6 1331 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 LINC01565O15544 149 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 BMP15O95972 392 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 POMCP01189 267 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 PRKCBP05771 671 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 ITGA4P13612 1032 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 AKAP5P24588 427 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 LONP1P36776 959 aaKnown RBP13.92□□□□□ -0.18
CHGA-203ENST00000553866 NPTX2P47972 431 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 SLC11A1P49279 550 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 MRPS5P82675 430 aaKnown RBP13.92□□□□□ -0.18
CHGA-203ENST00000553866 MCM6Q14566 821 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 TIGD5Q53EQ6 642 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 SLC27A1Q6PCB7 646 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 KIFAP3Q92845 792 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 PGBD4Q96DM1 585 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 IFT74Q96LB3 600 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 GBP3Q9H0R5 595 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
CHGA-203ENST00000553866 UBE2ZQ9H832 354 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms