RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 RGS18Q9NS28 235 aa9.12□□□□□ -0.95
RDH11-205ENST00000553816 MTUS1Q9ULD2 1270 aa9.12□□□□□ -0.95
RDH11-205ENST00000553816 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
RDH11-205ENST00000553816 MYO9BQ13459 2157 aa9.12□□□□□ -0.95
RDH11-205ENST00000553816 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 LPXNO60711 386 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 DGKIO75912 1065 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 MUTP22033 750 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 FAM189BP81408 668 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 HYIQ5T013 277 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 KRT79Q5XKE5 535 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 ZNF410Q86VK4 478 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 TCP11Q8WWU5 503 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 ARNTL2Q8WYA1 636 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 CHAMP1Q96JM3 812 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 CLIC6Q96NY7 704 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 POLR3FQ9H1D9 316 aaPredicted RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 RNF19AQ9NV58 838 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 FBXO2Q9UK22 296 aaPredicted RBP9.11□□□□□ -0.95
RDH11-205ENST00000553816 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 CHD9Q3L8U1 2897 aa9.11□□□□□ -0.95
RDH11-205ENST00000553816 CHD7Q9P2D1 2997 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 TRIP11Q15643 1979 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 DENND3A2RUS2 1198 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 ARHGEF35A5YM69 484 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 MEIS3P2A8K0S8 358 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 EYA4O95677 639 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 F13A1P00488 732 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 EDN1P05305 212 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 ZSCAN22P10073 491 aaPredicted RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 ATF7P17544 494 aaPredicted RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 CYP11B2P19099 503 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 PTENP60484 403 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 ERVK-21P61565 698 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 CDC42EP1Q00587 391 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 KARSQ15046 597 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 TMEM119Q4V9L6 283 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 PAN2Q504Q3 1202 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 SLC24A5Q71RS6 500 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 CATSPER4Q7RTX7 472 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 CABP7Q86V35 215 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 EXOC8Q8IYI6 725 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 EPSTI1Q96J88 318 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 CCDC43Q96MW1 224 aaKnown RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 YME1L1Q96TA2 773 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 RUSC1Q9BVN2 902 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 RAB34Q9BZG1 259 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 CSRNP2Q9H175 543 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 ZSCAN16Q9H4T2 348 aaPredicted RBP9.1□□□□□ -0.95
RDH11-205ENST00000553816 BLOC1S4Q9NUP1 217 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 STXBP5LQ9Y2K9 1186 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 ZDHHC9Q9Y397 364 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 COL6A3P12111 3177 aa9.1□□□□□ -0.95
RDH11-205ENST00000553816 REV3LO60673 3130 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 ADGRA3Q8IWK6 1321 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 ASAP2O43150 1006 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 BMP15O95972 392 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 FGFR1P11362 822 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 ZSCAN20P17040 1043 aaPredicted RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 SFPQP23246 707 aaKnown RBP eCLIP9.09□□□□□ -0.95
RDH11-205ENST00000553816 HOXA11P31270 313 aaPredicted RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 SLC12A3P55017 1021 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 MBTD1Q05BQ5 628 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 MAPK7Q13164 816 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 MXD4Q14582 209 aaPredicted RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 SLC39A14Q15043 492 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 AMHR2Q16671 573 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 LONRF3Q496Y0 759 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 ODR4Q5SWX8 454 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 UBXN11Q5T124 520 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 RINT1Q6NUQ1 792 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 C1orf186Q6ZWK4 172 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 SRGAP1Q7Z6B7 1085 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 CDR2LQ86X02 465 aaPredicted RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 ECHDC2Q86YB7 292 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 DAW1Q8N136 415 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 MCPH1Q8NEM0 835 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 GDPD5Q8WTR4 605 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 LPPQ93052 612 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 CPB2Q96IY4 423 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 TGS1Q96RS0 853 aaKnown RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 KIFC3Q9BVG8 833 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 C1orf112Q9NSG2 853 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 AGPAT5Q9NUQ2 364 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 LRFN2Q9ULH4 789 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms