RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.44
ACTN1-209ENST00000553659 PLCB3Q01970 1234 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 TMEM184AQ6ZMB5 413 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ZSCAN30Q86W11 494 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 REXO1Q8N1G1 1221 aaKnown RBP17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ZNF710Q8N1W2 664 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 TRIML1Q8N9V2 468 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 VN1R2Q8NFZ6 395 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 SUSD6Q92537 303 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 TMEM117Q9H0C3 514 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 TCEAL9Q9UHQ7 104 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
ACTN1-209ENST00000553659 SMTNL1A8MU46 457 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 HOXA2O43364 376 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 CIITAP33076 1130 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 LONP1P36776 959 aaKnown RBP17.76■□□□□ 0.43
ACTN1-209ENST00000553659 TXLNAP40222 546 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 NLRP11P59045 1033 aaKnown RBP17.76■□□□□ 0.43
ACTN1-209ENST00000553659 KCNC3Q14003 757 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
ACTN1-209ENST00000553659 PRR16Q569H4 304 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 EFCAB12Q6NXP0 572 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 SARM1Q6SZW1 724 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 PBXIP1Q96AQ6 731 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 RPGRIP1Q96KN7 1286 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 FAM167AQ96KS9 214 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 CASD1Q96PB1 797 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
ACTN1-209ENST00000553659 MYO10Q9HD67 2058 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 SRGAP2BP0DMP2 458 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-209ENST00000553659 MSNP26038 577 aaKnown RBP17.75■□□□□ 0.43
ACTN1-209ENST00000553659 TMOD1P28289 359 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 PRPHP41219 470 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 CLCN3P51790 818 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 IQCB1Q15051 598 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 EARS2Q5JPH6 523 aaKnown RBP17.75■□□□□ 0.43
ACTN1-209ENST00000553659 CT47A1Q5JQC4 288 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-209ENST00000553659 LRRC55Q6ZSA7 311 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
ACTN1-209ENST00000553659 CSRNP2Q9H175 543 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 ADAMTS10Q9H324 1103 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 NRBP2Q9NSY0 501 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 AKT3Q9Y243 479 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 KMT2EQ8IZD2 1858 aa17.75■□□□□ 0.43
ACTN1-209ENST00000553659 TRIOO75962 3097 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 SMC2O95347 1197 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 EIF4BP23588 611 aaKnown RBP17.74■□□□□ 0.43
ACTN1-209ENST00000553659 PTGDRQ13258 359 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 ZNF174Q15697 407 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 PLPP4Q5VZY2 271 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 ANKRD54Q6NXT1 300 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 ABI1Q8IZP0 508 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 LENG9Q96B70 501 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 TCF25Q9BQ70 676 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 S1PR5Q9H228 398 aa17.74■□□□□ 0.43
ACTN1-209ENST00000553659 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
ACTN1-209ENST00000553659 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 WDR64B1ANS9 1081 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 IKBKBO14920 756 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 CDC25BP30305 580 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 PPM1AP35813 382 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 TECP42680 631 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 KRT17Q04695 432 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 SIGLEC14Q08ET2 396 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 POSTNQ15063 836 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 ECHDC2Q86YB7 292 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 LRRC43Q8N309 656 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 LRRC71Q8N4P6 559 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 ZNF558Q96NG5 402 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 PRRX2Q99811 253 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 ENTPD7Q9NQZ7 604 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
ACTN1-209ENST00000553659 HIDE1A8MVS5 230 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 POLR2DO15514 142 aaKnown RBP17.72■□□□□ 0.43
ACTN1-209ENST00000553659 ZNF862O60290 1169 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 OATP04181 439 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 HOXB8P17481 243 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-209ENST00000553659 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 DHX8Q14562 1220 aaKnown RBP17.72■□□□□ 0.43
ACTN1-209ENST00000553659 LONRF3Q496Y0 759 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 IER5LQ5T953 404 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 NT5DC1Q5TFE4 455 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 SYCE2Q6PIF2 218 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 C11orf57Q6ZUT1 292 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-209ENST00000553659 NEK8Q86SG6 692 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
ACTN1-209ENST00000553659 FBXL6Q8N531 539 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 IQUBQ8NA54 791 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 AK8Q96MA6 479 aa17.72■□□□□ 0.43
ACTN1-209ENST00000553659 SPG21Q9NZD8 308 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms