RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 B4GALT3O60512 393 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 ITGB1P05556 798 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 RB1P06400 928 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 AXLP30530 894 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 NPTX2P47972 431 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 PEX3P56589 373 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 RAD54LQ92698 747 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 PLAGL2Q9UPG8 496 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 HES2Q9Y543 173 aa13.13□□□□□ -0.31
LMBR1L-228ENST00000552879 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 UNC80Q8N2C7 3258 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 ACKR2O00590 384 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 SPTLC2O15270 562 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 ERLIN2O94905 339 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 DDIT3P35638 169 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 PBX3P40426 434 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 RAB27AP51159 221 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 AXDND1Q5T1B0 1012 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 KLHL23Q8NBE8 558 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 DEPTORQ8TB45 409 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 SPPL3Q8TCT6 385 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 P2RX5Q93086 422 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 CALML4Q96GE6 196 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 NTPCRQ9BSD7 190 aaKnown RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 C2orf40Q9H1Z8 148 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 PRMT7Q9NVM4 692 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 ARHGAP28Q9P2N2 729 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 IPPQ9Y573 584 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 CNTNAP2Q9UHC6 1331 aa13.12□□□□□ -0.31
LMBR1L-228ENST00000552879 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 HOXA2O43364 376 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PPP6R2O75170 966 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 YEATS4O95619 227 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PRKCBP05771 671 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 SKIP12755 728 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 GIT2Q14161 759 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 STK38Q15208 465 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 SHC4Q6S5L8 630 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 MICALL1Q8N3F8 863 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 MRPL38Q96DV4 380 aaKnown RBP13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 NXF3Q9H4D5 531 aaKnown RBP13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 MYO9BQ13459 2157 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
LMBR1L-228ENST00000552879 INPPL1O15357 1258 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 SLC16A4O15374 487 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 DDHD2O94830 711 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 NPTXRO95502 500 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 PLS3P13797 630 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 LIG1P18858 919 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 IRS1P35568 1242 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 MAPK6Q16659 721 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 LRRC43Q8N309 656 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 TMEM161BQ8NDZ6 487 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 SPIRE2Q8WWL2 714 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 PGBD4Q96DM1 585 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 REEP2Q9BRK0 252 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
LMBR1L-228ENST00000552879 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms