RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PLA2G4DQ86XP0 818 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 RNF168Q8IYW5 571 aaPredicted RBP12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 FRYQ5TBA9 3013 aa12.85□□□□□ -0.35
SUPT16H-202ENST00000552829 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 LAMTOR5O43504 91 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 SOD2P04179 222 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 ADH1AP07327 375 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 CYP3A4P08684 503 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 SKIP12755 728 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 GPC5P78333 572 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 TMTC3Q6ZXV5 915 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 TAS1R1Q7RTX1 841 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 HEATR3Q7Z4Q2 680 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 ATRIPQ8WXE1 791 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 CLDN23Q96B33 292 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 TBC1D22BQ9NU19 505 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 FAM105AQ9NUU6 356 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 SPATA6Q9NWH7 488 aaPredicted RBP12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 INPP5FQ9Y2H2 1132 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 ZFYVE26Q68DK2 2539 aa12.84□□□□□ -0.35
SUPT16H-202ENST00000552829 ZZEF1O43149 2961 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 NRP1O14786 923 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 SLC30A4O14863 429 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 GLUD1P00367 558 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 ALDH2P05091 517 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 PSAPP07602 524 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 RXRAP19793 462 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 LIFRP42702 1097 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 MAGEA9P43362 315 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 AFF1P51825 1210 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 PRKCQQ04759 706 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 DRP2Q13474 957 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 LILRA6Q6PI73 481 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 AGMOQ6ZNB7 445 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 MRPL10Q7Z7H8 261 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 CEP89Q96ST8 783 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 GCOM2Q9BZD3 368 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 GABBR1Q9UBS5 961 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 FAN1Q9Y2M0 1017 aa12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 ZFP37Q9Y6Q3 630 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-202ENST00000552829 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 FAM170BA6NMN3 283 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 CALM1P0DP23 149 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 CALM2P0DP24 149 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 CALM3P0DP25 149 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 ZNF76P36508 570 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 RAB27AP51159 221 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 AK2P54819 239 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 CDC42EP1Q00587 391 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 NUCB1Q02818 461 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 FUT2Q10981 343 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 MLF2Q15773 248 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 SLC44A4Q53GD3 710 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PPM1JQ5JR12 505 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 FGF14Q92915 247 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PRKD2Q9BZL6 878 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PRMT8Q9NR22 394 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 MARCH5Q9NX47 278 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 RALYQ9UKM9 306 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 SSX2IPQ9Y2D8 614 aa12.82□□□□□ -0.36
SUPT16H-202ENST00000552829 PKD1L2Q7Z442 2459 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms