RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 TARBP2Q15633 366 aaKnown RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 PRR16Q569H4 304 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 TWF2Q6IBS0 349 aaKnown RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 GLB1LQ6UWU2 654 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 AGMOQ6ZNB7 445 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 SPATA31D4Q6ZUB0 917 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 KSR1Q8IVT5 923 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 C1orf210Q8IVY1 113 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 RUBCNQ92622 972 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 ZNF707Q96C28 371 aaPredicted RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 FAM167AQ96KS9 214 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 TRAIPQ9BWF2 469 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 WDR6Q9NNW5 1121 aaKnown RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 CHST12Q9NRB3 414 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 DISC1Q9NRI5 854 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 FAM105AQ9NUU6 356 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 MARCH5Q9NX47 278 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 EPS15L1Q9UBC2 864 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 PIN4Q9Y237 131 aaKnown RBP9.57□□□□□ -0.88
CDK4-213ENST00000552713 SAMM50Q9Y512 469 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 CACNA1GO43497 2377 aa9.57□□□□□ -0.88
CDK4-213ENST00000552713 CLUHO75153 1309 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 F8W810 466 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 TEX28O15482 410 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 ZNF623O75123 536 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 RFX1P22670 979 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 RTN1Q16799 776 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 MTERF2Q49AM1 385 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 CREB3L3Q68CJ9 461 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 CMASQ8NFW8 434 aaPredicted RBP9.56□□□□□ -0.88
CDK4-213ENST00000552713 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
CDK4-213ENST00000552713 EMILIN2Q9BXX0 1053 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
CDK4-213ENST00000552713 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 SIT1Q9Y3P8 196 aa9.56□□□□□ -0.88
CDK4-213ENST00000552713 IGKV6-21A0A0C4DH24 114 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 WDR64B1ANS9 1081 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 NRP1O14786 923 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 MSH4O15457 936 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 CHMP2AO43633 222 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 EFEMP2O95967 443 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 POMCP01189 267 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 ATXN1P54253 815 aaKnown RBP9.55□□□□□ -0.88
CDK4-213ENST00000552713 AK2P54819 239 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 SETQ01105 290 aaPredicted RBP9.55□□□□□ -0.88
CDK4-213ENST00000552713 HTR4Q13639 388 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 AAMPQ13685 434 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 NECTIN1Q15223 517 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 UBXN11Q5T124 520 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 ZNF710Q8N1W2 664 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 PJA1Q8NG27 643 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 B3GALT6Q96L58 329 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 UNC45AQ9H3U1 944 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 MRPL17Q9NRX2 175 aaKnown RBP9.55□□□□□ -0.88
CDK4-213ENST00000552713 RBM28Q9NW13 759 aaKnown RBP9.55□□□□□ -0.88
CDK4-213ENST00000552713 TCEAL9Q9UHQ7 104 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 FAN1Q9Y2M0 1017 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 MTF2Q9Y483 593 aaPredicted RBP9.55□□□□□ -0.88
CDK4-213ENST00000552713 PCDHB2Q9Y5E7 798 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 F5P12259 2224 aa9.55□□□□□ -0.88
CDK4-213ENST00000552713 SDK1Q7Z5N4 2213 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 ANHXE9PGG2 379 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 hCG_1984214I3L0E3 225 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 SOD2P04179 222 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 ALDH2P05091 517 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 LAMP2P13473 410 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 SFPQP23246 707 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDK4-213ENST00000552713 CIITAP33076 1130 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 EXOSC10Q01780 885 aaKnown RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 PFKFB3Q16875 520 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 KIAA0319Q5VV43 1072 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 ZC3H14Q6PJT7 736 aaKnown RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 GET4Q7L5D6 327 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 CATSPER4Q7RTX7 472 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 MRPL10Q7Z7H8 261 aaKnown RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 PALB2Q86YC2 1186 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 RHPN2Q8IUC4 686 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 GLYCTKQ8IVS8 523 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 TEX2Q8IWB9 1127 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 RNF168Q8IYW5 571 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 ZNF713Q8N859 430 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 NLRP4Q96MN2 994 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 ZMYND12Q9H0C1 365 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 NT5C3AQ9H0P0 336 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 MINDY3Q9H8M7 445 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 MIOSQ9NXC5 875 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 SEPT9Q9UHD8 586 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 PRG3Q9Y2Y8 225 aaPredicted RBP9.54□□□□□ -0.88
CDK4-213ENST00000552713 NUMBLQ9Y6R0 609 aa9.54□□□□□ -0.88
CDK4-213ENST00000552713 DCDC2BA2VCK2 349 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms