RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	GBP6	Q6ZN66	633 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	CCAR2	Q8N163	923 aa	Known RBP	13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	POMGNT1	Q8WZA1	660 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	FBXL18	Q96ME1	805 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	CCDC113	Q9H0I3	377 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	AP5M1	Q9H0R1	490 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	PLCB1	Q9NQ66	1216 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	AGPAT5	Q9NUQ2	364 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	CEP72	Q9P209	647 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	GABRQ	Q9UN88	632 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	DOCK3	Q8IZD9	2030 aa		13.85	□□□□□ -0.19
CACNB3-223	ENST00000552480	CASP8AP2	Q9UKL3	1982 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	THSD7B	Q9C0I4	1608 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	RRN3P2	A6NIE6	340 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	EPHB6	O15197	1021 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	N4BP1	O75113	896 aa	Known RBP	13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	TBC1D8	O95759	1140 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	F2	P00734	622 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	CYBA	P13498	195 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	KLRC1	P26715	233 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	FMO5	P49326	533 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	FLT3LG	P49771	235 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	CLCN3	P51790	818 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	VAMP7	P51809	220 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	POU5F1B	Q06416	359 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	PPFIA1	Q13136	1202 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	GRIK4	Q16099	956 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	SNRNP35	Q16560	246 aa	Known RBP	13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	MEA1	Q16626	185 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	EXOC3L4	Q17RC7	722 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	SLFN12L	Q6IEE8	588 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	MTHFD1L	Q6UB35	978 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	RHPN2	Q8IUC4	686 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	GPD1L	Q8N335	351 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	METTL13	Q8N6R0	699 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	RDH13	Q8NBN7	331 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	RNF149	Q8NC42	400 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	LENG1	Q96BZ8	264 aa	Predicted RBP	13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	GAN	Q9H2C0	597 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	KIAA1586	Q9HCI6	787 aa		13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.84	□□□□□ -0.19
CACNB3-223	ENST00000552480	GOLGA8IP	A6NC78	632 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	SOWAHD	A6NJG2	315 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	GOLGA8J	A6NMD2	632 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	P4HA2	O15460	535 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	NOL4	O94818	638 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	ADRB2	P07550	413 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRIM49	P0CI25	452 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRIM49C	P0CI26	452 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	SRGAP2C	P0DJJ0	459 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TMOD1	P28289	359 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	HNRNPH3	P31942	346 aa	Known RBP	13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	MAP2K2	P36507	400 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	MYL7	Q01449	175 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	PRKCZ	Q05513	592 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	DPY19L2P1	Q6NXN4	242 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	PDXDC1	Q6P996	788 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZPBP2	Q6X784	338 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	CACNA2D4	Q7Z3S7	1137 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	CBWD2	Q8IUF1	395 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZSWIM2	Q8NEG5	633 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRPV1	Q8NER1	839 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TMC2	Q8TDI7	906 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRIB2	Q92519	343 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	BAP1	Q92560	729 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	SAAL1	Q96ER3	474 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	MFSD14A	Q96MC6	490 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	CRACR2A	Q9BSW2	395 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	NFKBIZ	Q9BYH8	718 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	NUCKS1	Q9H1E3	243 aa	Known RBP	13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	GCNT4	Q9P109	453 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	DAAM1	Q9Y4D1	1078 aa		13.83	□□□□□ -0.2
CACNB3-223	ENST00000552480	USP27X	A6NNY8	438 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	HAS3	O00219	553 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PMM2	O15305	246 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZSCAN12	O43309	604 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	EXTL3	O43909	919 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	MSC	O60682	206 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	DUSP11	O75319	330 aa	Known RBP	13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	LDHA	P00338	332 aa	Known RBP	13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	EDN1	P05305	212 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PRKCB	P05771	671 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PON1	P27169	355 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PHKA2	P46019	1235 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PSEN2	P49810	448 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	CDK17	Q00537	523 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	CYP24A1	Q07973	514 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	MFSD10	Q14728	455 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	MAPK6	Q16659	721 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	KLHDC7A	Q5VTJ3	777 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	WDR59	Q6PJI9	974 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	RAD9B	Q6WBX8	426 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	USP37	Q86T82	979 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	PLEKHO2	Q8TD55	490 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	KAT2B	Q92831	832 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	NLRP4	Q96MN2	994 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	KATNAL1	Q9BW62	490 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	TARS2	Q9BW92	718 aa	Known RBP	13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	MRPL4	Q9BYD3	311 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms