RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 LRWD1Q9UFC0 647 aa15.56■□□□□ 0.08
DDX54-210ENST00000552375 PRKAG3Q9UGI9 489 aa15.56■□□□□ 0.08
DDX54-210ENST00000552375 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
DDX54-210ENST00000552375 CD207Q9UJ71 328 aa15.56■□□□□ 0.08
DDX54-210ENST00000552375 PCDHB2Q9Y5E7 798 aa15.56■□□□□ 0.08
DDX54-210ENST00000552375 CARNS1A5YM72 827 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 MEIS3P2A8K0S8 358 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 MBTPS2O43462 519 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 STX6O43752 255 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 ERLIN2O94905 339 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 HOXA11P31270 313 aaPredicted RBP15.55■□□□□ 0.08
DDX54-210ENST00000552375 PTENP60484 403 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
DDX54-210ENST00000552375 ZP2Q05996 745 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 CAPSQ13938 189 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 TFDP1Q14186 410 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 SMAD2Q15796 467 aaKnown RBP15.55■□□□□ 0.08
DDX54-210ENST00000552375 ECM1Q16610 540 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 DUSP6Q16828 381 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 NOMO2Q5JPE7 1267 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 PLPP4Q5VZY2 271 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 DTHD1Q6ZMT9 781 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 RBM23Q86U06 439 aaKnown RBP15.55■□□□□ 0.08
DDX54-210ENST00000552375 SMRP1Q8NCR6 262 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 PGBD4Q96DM1 585 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 CCDC51Q96ER9 411 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 C1QTNF1Q9BXJ1 281 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
DDX54-210ENST00000552375 TBC1D13Q9NVG8 400 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 CLEC1BQ9P126 229 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 MTMR6Q9Y217 621 aa15.55■□□□□ 0.08
DDX54-210ENST00000552375 CNTNAP2Q9UHC6 1331 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 TSPAN1O60635 241 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 ZC3H11AO75152 810 aaKnown RBP eCLIP15.54■□□□□ 0.08
DDX54-210ENST00000552375 EYA4O95677 639 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 XRCC6P12956 609 aaKnown RBP eCLIP15.54■□□□□ 0.08
DDX54-210ENST00000552375 SSTR3P32745 418 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 ARL2P36404 184 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 BCAR1P56945 870 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 KRT17Q04695 432 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 MBTD1Q05BQ5 628 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 POU5F1BQ06416 359 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 COASYQ13057 564 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 SF3A1Q15459 793 aaKnown RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 LONRF3Q496Y0 759 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 UBXN11Q5T124 520 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 HAUS3Q68CZ6 603 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 ADHFE1Q8IWW8 467 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 KHSRPQ92945 711 aaKnown RBP eCLIP15.54■□□□□ 0.08
DDX54-210ENST00000552375 POLR3CQ9BUI4 534 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 POLR3FQ9H1D9 316 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 DBR1Q9UK59 544 aaKnown RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 BARX2Q9UMQ3 279 aaPredicted RBP15.54■□□□□ 0.08
DDX54-210ENST00000552375 INPP5FQ9Y2H2 1132 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 CLIC4Q9Y696 253 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 TCHHQ07283 1943 aa15.54■□□□□ 0.08
DDX54-210ENST00000552375 PLXNA4Q9HCM2 1894 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 INO80B-WBP1J3KQ70 363 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 PER2O15055 1255 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 OFD1O75665 1012 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 GLRA2P23416 452 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 RPA1P27694 616 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 AXLP30530 894 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 PRPHP41219 470 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 ALDH7A1P49419 539 aaKnown RBP15.53■□□□□ 0.08
DDX54-210ENST00000552375 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 AGMOQ6ZNB7 445 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
DDX54-210ENST00000552375 TMEM173Q86WV6 379 aaPredicted RBP15.53■□□□□ 0.08
DDX54-210ENST00000552375 IGSF22Q8N9C0 903 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 VN1R2Q8NFZ6 395 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 URGCPQ8TCY9 931 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 TMEM169Q96HH4 297 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 PLIN2Q99541 437 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 POP1Q99575 1024 aaKnown RBP15.53■□□□□ 0.08
DDX54-210ENST00000552375 RAB34Q9BZG1 259 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 RSAD1Q9HA92 442 aa15.53■□□□□ 0.08
DDX54-210ENST00000552375 DDX19AQ9NUU7 478 aaKnown RBP15.53■□□□□ 0.08
DDX54-210ENST00000552375 ARHGEF35A5YM69 484 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 HIDE1A8MVS5 230 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 LAD1O00515 517 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 NCLP19338 710 aaKnown RBP15.52■□□□□ 0.08
DDX54-210ENST00000552375 GRIN1Q05586 938 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.08
DDX54-210ENST00000552375 AMHR2Q16671 573 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 TMC7Q7Z402 723 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 CNNM3Q8NE01 707 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 NACC1Q96RE7 527 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 EPHX3Q9H6B9 360 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 GPRC5CQ9NQ84 441 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.08
DDX54-210ENST00000552375 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
DDX54-210ENST00000552375 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms