RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 SPG21Q9NZD8 308 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 KANSL3Q9P2N6 904 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 BRWD1Q9NSI6 2320 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 CUL9Q8IWT3 2517 aa21.02■□□□□ 0.95
DDX54-208ENST00000551344 CNTNAP2Q9UHC6 1331 aa21.02■□□□□ 0.95
DDX54-208ENST00000551344 A0A1B0GUA9 196 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 MEIS3P2A8K0S8 358 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 E9PMD0 336 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 SLC26A4O43511 780 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 NAMPTP43490 491 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 ALDH7A1P49419 539 aaKnown RBP21.01■□□□□ 0.95
DDX54-208ENST00000551344 KRT17Q04695 432 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 FAM187BQ17R55 369 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 LONRF3Q496Y0 759 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 MRPS27Q92552 414 aaKnown RBP21.01■□□□□ 0.95
DDX54-208ENST00000551344 CPB2Q96IY4 423 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 IFT74Q96LB3 600 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 RSAD1Q9HA92 442 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 DAXXQ9UER7 740 aaPredicted RBP21.01■□□□□ 0.95
DDX54-208ENST00000551344 REV3LO60673 3130 aa21.01■□□□□ 0.95
DDX54-208ENST00000551344 VCANP13611 3396 aa21■□□□□ 0.95
DDX54-208ENST00000551344 SPTBN5Q9NRC6 3674 aaKnown RBP21■□□□□ 0.95
DDX54-208ENST00000551344 KCNQ1P51787 676 aa21■□□□□ 0.95
DDX54-208ENST00000551344 SF3A1Q15459 793 aaKnown RBP21■□□□□ 0.95
DDX54-208ENST00000551344 LEXMQ3ZCV2 418 aa21■□□□□ 0.95
DDX54-208ENST00000551344 SMG8Q8ND04 991 aaKnown RBP21■□□□□ 0.95
DDX54-208ENST00000551344 URGCPQ8TCY9 931 aa21■□□□□ 0.95
DDX54-208ENST00000551344 MICAL1Q8TDZ2 1067 aa21■□□□□ 0.95
DDX54-208ENST00000551344 BSNDQ8WZ55 320 aa21■□□□□ 0.95
DDX54-208ENST00000551344 TLR9Q9NR96 1032 aa21■□□□□ 0.95
DDX54-208ENST00000551344 TBC1D13Q9NVG8 400 aa21■□□□□ 0.95
DDX54-208ENST00000551344 IPPQ9Y573 584 aa21■□□□□ 0.95
DDX54-208ENST00000551344 KIAA1671Q9BY89 1806 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 ITGA4P13612 1032 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 KCNA5P22460 613 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 IRS1P35568 1242 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 EFNA5P52803 228 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 BCAR1P56945 870 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 RNASELQ05823 741 aaKnown RBP20.99■□□□□ 0.95
DDX54-208ENST00000551344 HYAL1Q12794 435 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 ZRSR1Q15695 479 aaKnown RBP20.99■□□□□ 0.95
DDX54-208ENST00000551344 MAPK6Q16659 721 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 CTC1Q2NKJ3 1217 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 RINT1Q6NUQ1 792 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 HACE1Q8IYU2 909 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 SLC39A11Q8N1S5 342 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 DEPTORQ8TB45 409 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 CDK5RAP3Q96JB5 506 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 EIF2AQ9BY44 585 aaKnown RBP20.99■□□□□ 0.95
DDX54-208ENST00000551344 TRIM6Q9C030 488 aaPredicted RBP20.99■□□□□ 0.95
DDX54-208ENST00000551344 INPP5FQ9Y2H2 1132 aa20.99■□□□□ 0.95
DDX54-208ENST00000551344 TTC28Q96AY4 2481 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 ACKR2O00590 384 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 B4GALT5O43286 388 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 LONP1P36776 959 aaKnown RBP20.98■□□□□ 0.95
DDX54-208ENST00000551344 UBA7P41226 1012 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 ERVFC1P60507 584 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 SLC27A1Q6PCB7 646 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 C1orf186Q6ZWK4 172 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 KCNK18Q7Z418 384 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 SYT2Q8N9I0 419 aaPredicted RBP20.98■□□□□ 0.95
DDX54-208ENST00000551344 ADAMTS19Q8TE59 1207 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 PNMA5Q96PV4 448 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 TIPINQ9BVW5 301 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 NRDE2Q9H7Z3 1164 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 C17orf75Q9HAS0 396 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 POLD4Q9HCU8 107 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 NGRNQ9NPE2 291 aaKnown RBP20.98■□□□□ 0.95
DDX54-208ENST00000551344 CLDND1Q9NY35 253 aa20.98■□□□□ 0.95
DDX54-208ENST00000551344 XIRP2A4UGR9 3374 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 FSCN2O14926 492 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 CSPG5O95196 566 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 PBX3P40426 434 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 RESTQ13127 1097 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 PUS10Q3MIT2 529 aaKnown RBP20.97■□□□□ 0.95
DDX54-208ENST00000551344 CABP7Q86V35 215 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 DRC1Q96MC2 740 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
DDX54-208ENST00000551344 IGFLR1Q9H665 355 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 FOXD4L1Q9NU39 408 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 KCND2Q9NZV8 630 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 KCNG1Q9UIX4 513 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 MTMR6Q9Y217 621 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 GIT1Q9Y2X7 761 aa20.97■□□□□ 0.95
DDX54-208ENST00000551344 INPPL1O15357 1258 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 STX6O43752 255 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 ZC3H11AO75152 810 aaKnown RBP eCLIP20.96■□□□□ 0.95
DDX54-208ENST00000551344 ALDH2P05091 517 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 GALTP07902 379 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
DDX54-208ENST00000551344 GUCY2CP25092 1073 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 ADAM15Q13444 863 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 PRPF4BQ13523 1007 aaKnown RBP20.96■□□□□ 0.95
DDX54-208ENST00000551344 TMEM119Q4V9L6 283 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 EP400NLQ6ZTU2 488 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 HSCBQ8IWL3 235 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.96■□□□□ 0.95
DDX54-208ENST00000551344 CALML4Q96GE6 196 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms