RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
GPN3-208ENST00000550974 PLA2G2FQ9BZM2 168 aa12.88□□□□□ -0.35
GPN3-208ENST00000550974 VPS45Q9NRW7 570 aa12.88□□□□□ -0.35
GPN3-208ENST00000550974 SLC9A2Q9UBY0 812 aa12.88□□□□□ -0.35
GPN3-208ENST00000550974 FAN1Q9Y2M0 1017 aa12.88□□□□□ -0.35
GPN3-208ENST00000550974 HBP1O60381 514 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 ZMYND10O75800 440 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 CAPNS1P04632 268 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 ALDH2P05091 517 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
GPN3-208ENST00000550974 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 GLUD2P49448 558 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
GPN3-208ENST00000550974 TRAF1Q13077 416 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 ALX1Q15699 326 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 ESR2Q92731 530 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 PIGSQ96S52 555 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 POLIQ9UNA4 740 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
GPN3-208ENST00000550974 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 NRP1O14786 923 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 OFD1O75665 1012 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 DDHD2O94830 711 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 CHRNB1P11230 501 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
GPN3-208ENST00000550974 ACTR2P61160 394 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 DEFB124Q8NES8 71 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 FAM193BQ96PV7 902 aaPredicted RBP12.86□□□□□ -0.35
GPN3-208ENST00000550974 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
GPN3-208ENST00000550974 HELZ2Q9BYK8 2649 aaKnown RBP12.86□□□□□ -0.35
GPN3-208ENST00000550974 AKAP13Q12802 2813 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 ECI2O75521 394 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
GPN3-208ENST00000550974 PHKA2P46019 1235 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 SLC26A2P50443 739 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 FGD1P98174 961 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 ZNF484Q5JVG2 852 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 DNASE1L2Q92874 299 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 NAV2Q8IVL1 2488 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 NEDD4P46934 1319 aa12.85□□□□□ -0.35
GPN3-208ENST00000550974 LAMA5O15230 3695 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 COL1A2P08123 1366 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 TICRRQ7Z2Z1 1910 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 C22orf31O95567 290 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 PCP11498 1178 aaKnown RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 CLCN3P51790 818 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 SCAPQ12770 1279 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 GRM2Q14416 872 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 LILRA6Q6PI73 481 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 URGCPQ8TCY9 931 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 CUL5Q93034 780 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 BRD9Q9H8M2 597 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 RBM12Q9NTZ6 932 aaKnown RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
GPN3-208ENST00000550974 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
GPN3-208ENST00000550974 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 BACH1O14867 736 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 CCL16O15467 120 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 C1QL1O75973 258 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
GPN3-208ENST00000550974 PXNP49023 591 aaPredicted RBP12.83□□□□□ -0.36
GPN3-208ENST00000550974 UAP1L1Q3KQV9 507 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
GPN3-208ENST00000550974 TANGO2Q6ICL3 276 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 Q6ZS52 159 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
GPN3-208ENST00000550974 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 B3GALT6Q96L58 329 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 SDF4Q9BRK5 362 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 RAI2Q9Y5P3 530 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 UBIAD1Q9Y5Z9 338 aa12.83□□□□□ -0.36
GPN3-208ENST00000550974 PIAS3Q9Y6X2 628 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms