RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SFR1Q86XK3 245 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 TMEM161BQ8NDZ6 487 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 ST6GALNAC4Q9H4F1 302 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 MRPL44Q9H9J2 332 aaKnown RBP23.61■■□□□ 1.37
NEK3-202ENST00000550841 C1orf112Q9NSG2 853 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 PCDHB13Q9Y5F0 798 aa23.61■■□□□ 1.37
NEK3-202ENST00000550841 K7ENM7 598 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 ENPP3O14638 875 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 PRKCBP05771 671 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 COASYQ13057 564 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 PSMD2Q13200 908 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 ALCAMQ13740 583 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 ZNF720Q7Z2F6 126 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 KIFC3Q9BVG8 833 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 CCDC113Q9H0I3 377 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 TMX1Q9H3N1 280 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 AGPAT5Q9NUQ2 364 aa23.6■■□□□ 1.37
NEK3-202ENST00000550841 ADGRA3Q8IWK6 1321 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 ZBBXA8MT70 800 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 SMC2O95347 1197 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 RPN1P04843 607 aaKnown RBP23.59■■□□□ 1.37
NEK3-202ENST00000550841 CASP1P29466 404 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 MCM4P33991 863 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 KCNJ6P48051 423 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 DPYDQ12882 1025 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 PRPF4BQ13523 1007 aaKnown RBP23.59■■□□□ 1.37
NEK3-202ENST00000550841 TMEM132AQ24JP5 1023 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 HVCN1Q96D96 273 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 CCDC51Q96ER9 411 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 ADAM2Q99965 735 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 TSPYL2Q9H2G4 693 aaPredicted RBP23.59■■□□□ 1.37
NEK3-202ENST00000550841 RGS18Q9NS28 235 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 EXOC1Q9NV70 894 aa23.59■■□□□ 1.37
NEK3-202ENST00000550841 PIN4Q9Y237 131 aaKnown RBP23.59■■□□□ 1.37
NEK3-202ENST00000550841 TSPAN1O60635 241 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 AMHP03971 560 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 SKIP12755 728 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 PTMSP20962 102 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 NMT1P30419 496 aaKnown RBP23.58■■□□□ 1.37
NEK3-202ENST00000550841 GTF2BQ00403 316 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 DSC3Q14574 896 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 SHHQ15465 462 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 NOTUMQ6P988 496 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 APBB1IPQ7Z5R6 666 aaPredicted RBP23.58■■□□□ 1.37
NEK3-202ENST00000550841 FIZ1Q96SL8 496 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 MRPL4Q9BYD3 311 aaKnown RBP23.58■■□□□ 1.37
NEK3-202ENST00000550841 MTMR10Q9NXD2 777 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 SLC4A7Q9Y6M7 1214 aa23.58■■□□□ 1.37
NEK3-202ENST00000550841 DLL1O00548 723 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 AMHR2Q16671 573 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 TCTN1Q2MV58 587 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 FAM26FQ5R3K3 315 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 TWF2Q6IBS0 349 aaKnown RBP23.57■■□□□ 1.36
NEK3-202ENST00000550841 SLC24A5Q71RS6 500 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 PHOSPHO2Q8TCD6 241 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 RNPC3Q96LT9 517 aaKnown RBP23.57■■□□□ 1.36
NEK3-202ENST00000550841 GTPBP4Q9BZE4 634 aaKnown RBP23.57■■□□□ 1.36
NEK3-202ENST00000550841 RMND1Q9NWS8 449 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 TBC1D7Q9P0N9 293 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 TBX20Q9UMR3 447 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 EXOC7Q9UPT5 735 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 STXBP5LQ9Y2K9 1186 aa23.57■■□□□ 1.36
NEK3-202ENST00000550841 A0A1B0GUA9 196 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 N4BP3O15049 544 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 KLRC4O43908 158 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 GCNT3O95395 438 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 MBD3O95983 291 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 PRR29P0C7W0 189 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 ARF4P18085 180 aaPredicted RBP23.56■■□□□ 1.36
NEK3-202ENST00000550841 HOXA11P31270 313 aaPredicted RBP23.56■■□□□ 1.36
NEK3-202ENST00000550841 EHHADHQ08426 723 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 KCNB1Q14721 858 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 KMT5BQ4FZB7 885 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 C9orf50Q5SZB4 431 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 RASIP1Q5U651 963 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 RTN4RL1Q86UN2 441 aaPredicted RBP23.56■■□□□ 1.36
NEK3-202ENST00000550841 GSDMAQ96QA5 445 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 TRAIPQ9BWF2 469 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 CNTNAP2Q9UHC6 1331 aa23.56■■□□□ 1.36
NEK3-202ENST00000550841 RAB27AP51159 221 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 WDR5P61964 334 aaKnown RBP23.55■■□□□ 1.36
NEK3-202ENST00000550841 PNOCQ13519 176 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 ZPBP2Q6X784 338 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 SMARCE1Q969G3 411 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 ACCSQ96QU6 501 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 SLC9A7Q96T83 725 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 ADPGKQ9BRR6 497 aa23.55■■□□□ 1.36
NEK3-202ENST00000550841 A0A0U1RQF3 1178 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.54■■□□□ 1.36
NEK3-202ENST00000550841 B4GALT5O43286 388 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 MGEA5O60502 916 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 RHOBTB3O94955 611 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 STAG3L1P0CL83 205 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 SARSP49591 514 aaKnown RBP23.54■■□□□ 1.36
NEK3-202ENST00000550841 FAM189BP81408 668 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 NT5DC1Q5TFE4 455 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 ATF7IP2Q5U623 682 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 SLC27A1Q6PCB7 646 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 TAS1R3Q7RTX0 852 aa23.54■■□□□ 1.36
NEK3-202ENST00000550841 BICD1Q96G01 975 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms