RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 CDC42EP1Q00587 391 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 XPNPEP1Q9NQW7 623 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 MIOSQ9NXC5 875 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 PRR23AA6NEV1 266 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 NRP1O14786 923 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 DEXIO95424 95 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 POMCP01189 267 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 SKIP12755 728 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 DNM2P50570 870 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 STK3Q13188 491 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 GIT2Q14161 759 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 LETM2Q2VYF4 491 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 CABP7Q86V35 215 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 RSPH1Q8WYR4 309 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 EIF2AQ9BY44 585 aaKnown RBP12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 INO80BQ9C086 356 aaPredicted RBP12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 RSAD1Q9HA92 442 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 RGL1Q9NZL6 768 aa12.96□□□□□ -0.33
SMARCD1-208ENST00000550280 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 INPPL1O15357 1258 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 SRGAP2CP0DJJ0 459 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 PSMA5P28066 241 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 DSC1Q08554 894 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 COLGALT2Q8IYK4 626 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 RSAD2Q8WXG1 361 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 CEP170P1Q96L14 293 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 KCNK12Q9HB15 430 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 HES2Q9Y543 173 aa12.95□□□□□ -0.34
SMARCD1-208ENST00000550280 WNT7AO00755 349 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 TEX28O15482 410 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 TSPAN1O60635 241 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 PAPLNO95428 1278 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 SOD2P04179 222 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 P4HBP07237 508 aaKnown RBP12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 MYBP10242 640 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 KLRC2P26717 231 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 CLCN5P51795 746 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 SCRN1Q12765 414 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 EMC2Q15006 297 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 AMHR2Q16671 573 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 KIAA0319Q5VV43 1072 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 CCDC149Q6ZUS6 474 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 SRGAP1Q7Z6B7 1085 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 FRMD5Q7Z6J6 570 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 ZNF707Q96C28 371 aaPredicted RBP12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 PGBD4Q96DM1 585 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 ZFP42Q96MM3 310 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 LXNQ9BS40 222 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 HERC2P3Q9BVR0 1158 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 FAN1Q9Y2M0 1017 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 PRG3Q9Y2Y8 225 aaPredicted RBP12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 IPPQ9Y573 584 aa12.94□□□□□ -0.34
SMARCD1-208ENST00000550280 CNTNAP2Q9UHC6 1331 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 C2CD2LO14523 706 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 RFPL2O75678 378 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 ALDH2P05091 517 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 AOC1P19801 751 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 YWHABP31946 246 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 MLH1P40692 756 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 RFC5P40937 340 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 TDGQ13569 410 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 CTTNQ14247 550 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 EPHA7Q15375 998 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms