RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 FSCN2O14926 492 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 PER2O15055 1255 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 DDHD2O94830 711 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 RESTQ13127 1097 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 TIGD5Q53EQ6 642 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-221ENST00000550100 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
LETMD1-221ENST00000550100 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 IPPQ9Y573 584 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
LETMD1-221ENST00000550100 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
LETMD1-221ENST00000550100 HOXA2O43364 376 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 EYA4O95677 639 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
LETMD1-221ENST00000550100 MUTP22033 750 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 BCAR1P56945 870 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 PLCB3Q01970 1234 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 MAPK7Q13164 816 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 ADAM15Q13444 863 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 TFDP1Q14186 410 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 LEXMQ3ZCV2 418 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 NOMO2Q5JPE7 1267 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 C1orf186Q6ZWK4 172 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 THNSL1Q8IYQ7 743 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 ABI1Q8IZP0 508 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 LRRC43Q8N309 656 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 MCPH1Q8NEM0 835 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 PABPC5Q96DU9 382 aaKnown RBP13.08□□□□□ -0.32
LETMD1-221ENST00000550100 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
LETMD1-221ENST00000550100 FZD8Q9H461 694 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
LETMD1-221ENST00000550100 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
LETMD1-221ENST00000550100 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 A0A1B0GUA9 196 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 SFI1A8K8P3 1242 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 K7ELQ4 463 aaPredicted RBP13.07□□□□□ -0.32
LETMD1-221ENST00000550100 TBX10O75333 385 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 GLP2RO95838 553 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 POMCP01189 267 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 LAG3P18627 525 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 PTPAQ15257 358 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
LETMD1-221ENST00000550100 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
LETMD1-221ENST00000550100 CLUL1Q15846 466 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 HYIQ5T013 277 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 EEF1DP3Q658K8 133 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 HAUS3Q68CZ6 603 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 GSTCDQ8NEC7 633 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 ZNF558Q96NG5 402 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
LETMD1-221ENST00000550100 CLDND1Q9NY35 253 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
LETMD1-221ENST00000550100 F8W810 466 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 ERLIN2O94905 339 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 NPTXRO95502 500 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 GALTP07902 379 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 IL9P15248 144 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 AKAP5P24588 427 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 NRIP1P48552 1158 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 SLC11A1P49279 550 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 RAB27AP51159 221 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 TMEM119Q4V9L6 283 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
LETMD1-221ENST00000550100 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 TAS1R3Q7RTX0 852 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 MRPS27Q92552 414 aaKnown RBP13.06□□□□□ -0.32
LETMD1-221ENST00000550100 SNX21Q969T3 373 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 INTS4Q96HW7 963 aaKnown RBP13.06□□□□□ -0.32
LETMD1-221ENST00000550100 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
LETMD1-221ENST00000550100 GAD1Q99259 594 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 GBP3Q9H0R5 595 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
LETMD1-221ENST00000550100 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 ARL5CA6NH57 179 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 HIP1RO75146 1068 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
LETMD1-221ENST00000550100 SKIP12755 728 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms