RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 CNTNAP2Q9UHC6 1331 aa21.72■■□□□ 1.07
ATF1-202ENST00000549612 TSPAN1O60635 241 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 MED24O75448 989 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 GLRA2P23416 452 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 AXLP30530 894 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 TECP42680 631 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 RBM10P98175 930 aaKnown RBP21.71■■□□□ 1.07
ATF1-202ENST00000549612 TMC7Q7Z402 723 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 TMEM169Q96HH4 297 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 NRDE2Q9H7Z3 1164 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 C11orf16Q9NQ32 467 aa21.71■■□□□ 1.07
ATF1-202ENST00000549612 DBR1Q9UK59 544 aaKnown RBP21.71■■□□□ 1.07
ATF1-202ENST00000549612 A0A087WWV3 80 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 NT5C1B-RDH14C9J2C7 533 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 USO1O60763 962 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 GPR37L1O60883 481 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 SRGAP2BP0DMP2 458 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 NCLP19338 710 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 U2AF2P26368 475 aaKnown RBP eCLIP21.7■■□□□ 1.06
ATF1-202ENST00000549612 RPA1P27694 616 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 RNASELQ05823 741 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 MBTD1Q05BQ5 628 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 GNL2Q13823 731 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 SMC1AQ14683 1233 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 AMHR2Q16671 573 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 TMEM31Q5JXX7 168 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 TMEM173Q86WV6 379 aaPredicted RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 MRPL43Q8N983 215 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 CNNM3Q8NE01 707 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 ERMNQ8TAM6 284 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 URGCPQ8TCY9 931 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 POLR3FQ9H1D9 316 aaPredicted RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 RSAD1Q9HA92 442 aa21.7■■□□□ 1.06
ATF1-202ENST00000549612 NOL7Q9UMY1 257 aaKnown RBP21.7■■□□□ 1.06
ATF1-202ENST00000549612 C2orf71A6NGG8 1288 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 INO80B-WBP1J3KQ70 363 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 GALTP07902 379 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 ALADP13716 330 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 NOTUMQ6P988 496 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 C4orf32Q8N8J7 132 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 SMG8Q8ND04 991 aaKnown RBP21.69■■□□□ 1.06
ATF1-202ENST00000549612 MCPH1Q8NEM0 835 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 IGSF21Q96ID5 467 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 NACC1Q96RE7 527 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 LRFN3Q9BTN0 628 aa21.69■■□□□ 1.06
ATF1-202ENST00000549612 USP15Q9Y4E8 981 aaPredicted RBP21.69■■□□□ 1.06
ATF1-202ENST00000549612 ST18O60284 1047 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 B4GALT3O60512 393 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 MUTP22033 750 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 FXR2P51116 673 aaKnown RBP eCLIP21.68■■□□□ 1.06
ATF1-202ENST00000549612 NCBP1Q09161 790 aaKnown RBP21.68■■□□□ 1.06
ATF1-202ENST00000549612 POTEGQ6S5H5 508 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 DDX53Q86TM3 631 aaKnown RBP21.68■■□□□ 1.06
ATF1-202ENST00000549612 ZNF280BQ86YH2 543 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 BCL7CQ8WUZ0 217 aaPredicted RBP21.68■■□□□ 1.06
ATF1-202ENST00000549612 EIF2AQ9BY44 585 aaKnown RBP21.68■■□□□ 1.06
ATF1-202ENST00000549612 ZBP1Q9H171 429 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 CSRNP2Q9H175 543 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 UBN1Q9NPG3 1134 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 KANSL3Q9P2N6 904 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 DNAJB4Q9UDY4 337 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 IPPQ9Y573 584 aa21.68■■□□□ 1.06
ATF1-202ENST00000549612 INPPL1O15357 1258 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 DCXO43602 365 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 SLC11A1P49279 550 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 AFF1P51825 1210 aaKnown RBP21.67■■□□□ 1.06
ATF1-202ENST00000549612 NBR1Q14596 966 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 BMS1Q14692 1282 aaKnown RBP21.67■■□□□ 1.06
ATF1-202ENST00000549612 HAUS3Q68CZ6 603 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 ANKRD54Q6NXT1 300 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 VPS52Q8N1B4 723 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 SUSD6Q92537 303 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 CPB2Q96IY4 423 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 GBP3Q9H0R5 595 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 GPRC5CQ9NQ84 441 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 IRAK3Q9Y616 596 aa21.67■■□□□ 1.06
ATF1-202ENST00000549612 ITGA4P13612 1032 aa21.66■■□□□ 1.06
ATF1-202ENST00000549612 ARF4P18085 180 aaPredicted RBP21.66■■□□□ 1.06
ATF1-202ENST00000549612 TOB1P50616 345 aaPredicted RBP21.66■■□□□ 1.06
ATF1-202ENST00000549612 CDCA2Q69YH5 1023 aaPredicted RBP21.66■■□□□ 1.06
ATF1-202ENST00000549612 TMEM175Q9BSA9 504 aa21.66■■□□□ 1.06
ATF1-202ENST00000549612 S1PR5Q9H228 398 aa21.66■■□□□ 1.06
ATF1-202ENST00000549612 KIF3AQ9Y496 699 aa21.66■■□□□ 1.06
ATF1-202ENST00000549612 FAM86C2PA6NEL3 165 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 B4GALT5O43286 388 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 DDHD2O94830 711 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 CXCL14O95715 111 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 CTSAP10619 480 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 HOXB8P17481 243 aaPredicted RBP21.65■■□□□ 1.06
ATF1-202ENST00000549612 LLGL2Q6P1M3 1020 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 SYCE2Q6PIF2 218 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 PADI6Q6TGC4 694 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 PPP4R3CPQ6ZMV5 832 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 CASP10Q92851 521 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 VN1R3Q9BXE9 311 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 RNF39Q9H2S5 420 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 STK39Q9UEW8 545 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 RAPGEFL1Q9UHV5 662 aa21.65■■□□□ 1.06
ATF1-202ENST00000549612 ARHGEF35A5YM69 484 aa21.64■■□□□ 1.05
ATF1-202ENST00000549612 LRRIQ4A6NIV6 560 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms