RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CCM2LQ9NUG4 571 aaPredicted RBP5.44□□□□□ -1.54
SNRPF-202ENST00000549580 OBP2AQ9NY56 170 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 MYOTQ9UBF9 498 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 SLC4A7Q9Y6M7 1214 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 ZRANB2O95218 330 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 CT47B1P0C2W7 299 aaPredicted RBP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 CSF2RBP32927 897 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 HERVK_113P62684 666 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 GRIN1Q05586 938 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 TMEM132BQ14DG7 1078 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 FSCN1Q16658 493 aaKnown RBP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 MINDY4Q4G0A6 757 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 Q6ZSN1 163 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 EPM2AIP1Q7L775 607 aaPredicted RBP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 CXorf67Q86X51 503 aaPredicted RBP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 NME9Q86XW9 330 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 TRIM48Q8IWZ4 208 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 AMOTL1Q8IY63 956 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 TTLL11Q8NHH1 800 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 SSH1Q8WYL5 1049 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 RTF1Q92541 710 aaKnown RBP5.43□□□□□ -1.54
SNRPF-202ENST00000549580 TEKT5Q96M29 485 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 AIFM3Q96NN9 605 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 AGAP2Q99490 1192 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 ZNF700Q9H0M5 742 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 ZBTB21Q9ULJ3 1066 aa5.43□□□□□ -1.54
SNRPF-202ENST00000549580 VSTM5A8MXK1 200 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 ACOT7O00154 380 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 FOXP2O15409 715 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 ZNF888P0CJ79 500 aaPredicted RBP5.42□□□□□ -1.54
SNRPF-202ENST00000549580 ACO1P21399 889 aaKnown RBP5.42□□□□□ -1.54
SNRPF-202ENST00000549580 AGXTP21549 392 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 ENPP1P22413 925 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 GLRBP48167 497 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 MTNR1BP49286 362 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 CSRP2Q16527 193 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 EFCAB2Q5VUJ9 269 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 CERS3Q8IU89 383 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 JADE3Q92613 823 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 FOXRED1Q96CU9 486 aaPredicted RBP5.42□□□□□ -1.54
SNRPF-202ENST00000549580 RIC8BQ9NVN3 520 aa5.42□□□□□ -1.54
SNRPF-202ENST00000549580 LOC102724159A0A0B4J2E5 919 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 PLIN1O60240 522 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 KNG1P01042 644 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 COMTP21964 271 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 MANFP55145 182 aaKnown RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 GBX1Q14549 363 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 NOLC1Q14978 699 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 PWP2Q15269 919 aaKnown RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 FNDC7Q5VTL7 733 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 KCNK18Q7Z418 384 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 RTN4RL1Q86UN2 441 aaPredicted RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 C1orf210Q8IVY1 113 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 FBXO41Q8TF61 875 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 TGFBRAP1Q8WUH2 860 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 ASB15Q8WXK1 588 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 EDAQ92838 391 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 RUNDC1Q96C34 613 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 CLIP3Q96DZ5 547 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 NEIL1Q96FI4 390 aaPredicted RBP5.41□□□□□ -1.54
SNRPF-202ENST00000549580 WRNIP1Q96S55 665 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 PSMD1Q99460 953 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 WNT8AQ9H1J5 351 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 PRDM11Q9NQV5 511 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 ANLNQ9NQW6 1124 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 DNAJC28Q9NX36 388 aa5.41□□□□□ -1.54
SNRPF-202ENST00000549580 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.4□□□□□ -1.54
SNRPF-202ENST00000549580 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
SNRPF-202ENST00000549580 GOLGA6L22H0YM25 854 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 ELL2O00472 640 aaPredicted RBP5.4□□□□□ -1.54
SNRPF-202ENST00000549580 ERC2O15083 957 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 IL33O95760 270 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 MMEP08473 750 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 AKAP5P24588 427 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 HDAC1Q13547 482 aaPredicted RBP5.4□□□□□ -1.54
SNRPF-202ENST00000549580 CLUL1Q15846 466 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 B3GNT9Q6UX72 402 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 PHYKPLQ8IUZ5 450 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 STPG3Q8N7X2 389 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 PLEKHG4BQ96PX9 1271 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 RPS6KC1Q96S38 1066 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 CHST12Q9NRB3 414 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 HSPBP1Q9NZL4 362 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 BTBD7Q9P203 1132 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 KCNG1Q9UIX4 513 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 ASB1Q9Y576 335 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 GPR45Q9Y5Y3 372 aa5.4□□□□□ -1.54
SNRPF-202ENST00000549580 PRAMEF25A6NGN4 478 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 TRIM27P14373 513 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 FAHP16930 419 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 ADKP55263 362 aaKnown RBP5.39□□□□□ -1.55
SNRPF-202ENST00000549580 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
SNRPF-202ENST00000549580 MRPS9P82933 396 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms