RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 HOXA11P31270 313 aaPredicted RBP19■□□□□ 0.63
LETMD1-216ENST00000548401 GTF2BQ00403 316 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 NFX1Q12986 1120 aaKnown RBP19■□□□□ 0.63
LETMD1-216ENST00000548401 KCNB1Q14721 858 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 MAPK6Q16659 721 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 ZNF365Q70YC5 407 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 ZNF720Q7Z2F6 126 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 ERCC4Q92889 916 aaPredicted RBP19■□□□□ 0.63
LETMD1-216ENST00000548401 PRO3102Q9H379 93 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 EXOC1Q9NV70 894 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 TBC1D7Q9P0N9 293 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 KCNG1Q9UIX4 513 aa19■□□□□ 0.63
LETMD1-216ENST00000548401 COL4A6Q14031 1691 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 ACKR2O00590 384 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 RHOBTB3O94955 611 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 ARF4P18085 180 aaPredicted RBP18.99■□□□□ 0.63
LETMD1-216ENST00000548401 ZC2HC1CQ53FD0 456 aaPredicted RBP18.99■□□□□ 0.63
LETMD1-216ENST00000548401 RASIP1Q5U651 963 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 EPM2AIP1Q7L775 607 aaPredicted RBP18.99■□□□□ 0.63
LETMD1-216ENST00000548401 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 KIAA0895Q8NCT3 520 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 HVCN1Q96D96 273 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 MRPL44Q9H9J2 332 aaKnown RBP18.99■□□□□ 0.63
LETMD1-216ENST00000548401 PIN4Q9Y237 131 aaKnown RBP18.99■□□□□ 0.63
LETMD1-216ENST00000548401 PCDHA5Q9Y5H7 936 aa18.99■□□□□ 0.63
LETMD1-216ENST00000548401 ZMYM2Q9UBW7 1377 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 K7ERI5 159 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 BAIAP3O94812 1187 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 GCNT3O95395 438 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 SARSP49591 514 aaKnown RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 ALCAMQ13740 583 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 C9orf50Q5SZB4 431 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 NT5DC1Q5TFE4 455 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 FAM43BQ6ZT52 329 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 RTN4RL1Q86UN2 441 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 HERVK_113Q902F9 699 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 FTHL17Q9BXU8 183 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 HOOK1Q9UJC3 728 aaKnown RBP18.98■□□□□ 0.63
LETMD1-216ENST00000548401 TBX20Q9UMR3 447 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 USP20Q9Y2K6 914 aa18.98■□□□□ 0.63
LETMD1-216ENST00000548401 ABHD14A-ACY1A0A1B0GW23 586 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 ABLIM1O14639 778 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 PIGRP01833 764 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 AXLP30530 894 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 ABCD1P33897 745 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 BMP8BP34820 402 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 WDR5P61964 334 aaKnown RBP18.97■□□□□ 0.63
LETMD1-216ENST00000548401 KCNA1Q09470 495 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 STK4Q13043 487 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 PRPF4BQ13523 1007 aaKnown RBP18.97■□□□□ 0.63
LETMD1-216ENST00000548401 CAMK4Q16566 473 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 L1TD1Q5T7N2 865 aaKnown RBP18.97■□□□□ 0.63
LETMD1-216ENST00000548401 OTOP2Q7RTS6 562 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 CPB2Q96IY4 423 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 GSDMAQ96QA5 445 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 MRPL4Q9BYD3 311 aaKnown RBP18.97■□□□□ 0.63
LETMD1-216ENST00000548401 NUP62CLQ9H1M0 184 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 PDZD7Q9H5P4 517 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 CHST12Q9NRB3 414 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 UBE4BO95155 1302 aa18.97■□□□□ 0.63
LETMD1-216ENST00000548401 TTC3P53804 2025 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 EIF3DO15371 548 aaKnown RBP eCLIP18.96■□□□□ 0.63
LETMD1-216ENST00000548401 FGBP02675 491 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 ACTN1P12814 892 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 PROZP22891 400 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 BMT2Q1RMZ1 405 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 UBXN11Q5T124 520 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 SLC39A4Q6P5W5 647 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 NOTUMQ6P988 496 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 SCFD1Q8WVM8 642 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 CCDC51Q96ER9 411 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 ACO2Q99798 780 aaKnown RBP18.96■□□□□ 0.63
LETMD1-216ENST00000548401 ADAM2Q99965 735 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 TARS2Q9BW92 718 aaKnown RBP18.96■□□□□ 0.63
LETMD1-216ENST00000548401 TRAIPQ9BWF2 469 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 UBE2OQ9C0C9 1292 aaKnown RBP18.96■□□□□ 0.63
LETMD1-216ENST00000548401 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 CXXC1Q9P0U4 656 aaPredicted RBP18.96■□□□□ 0.63
LETMD1-216ENST00000548401 MAN1B1Q9UKM7 699 aa18.96■□□□□ 0.63
LETMD1-216ENST00000548401 A0A1B0GUA9 196 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 C9IYK1 514 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 EFCAB14O75071 495 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 SMC2O95347 1197 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 HOXD13P35453 343 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 DEFB103AP81534 67 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 STRN3Q13033 797 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 PSMD2Q13200 908 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 IKBKEQ14164 716 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 SHHQ15465 462 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 ATF7IP2Q5U623 682 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 EEF1DP3Q658K8 133 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 ZPBP2Q6X784 338 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.95■□□□□ 0.62
LETMD1-216ENST00000548401 RBM43Q6ZSC3 357 aaKnown RBP18.95■□□□□ 0.62
LETMD1-216ENST00000548401 PTPRHQ9HD43 1115 aa18.95■□□□□ 0.62
LETMD1-216ENST00000548401 SLC39A2Q9NP94 309 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms