RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 CCDC42Q96M95 316 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 PARVGQ9HBI0 331 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 TYW1Q9NV66 732 aaKnown RBP18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 ODF2LQ9ULJ1 636 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 GUCA1BQ9UMX6 200 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 BACH1O14867 736 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 HIP1RO75146 1068 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 TADA3O75528 432 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 ARIH2O95376 493 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 SUPT20HL2P0C7V6 817 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 TLE2Q04725 743 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 CXCL17Q6UXB2 119 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 MAEAQ7L5Y9 396 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 CACNA2D4Q7Z3S7 1137 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 FRMD5Q7Z6J6 570 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 KIAA1328Q86T90 577 aa18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 CCDC43Q96MW1 224 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-204ENST00000547687 LRRC53A6NM62 1247 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 ATG7O95352 703 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 ZNF131P52739 623 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 MAPK7Q13164 816 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 TUBB2AQ13885 445 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 NEDD9Q14511 834 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 FSCN1Q16658 493 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 XKR9Q5GH70 373 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 DAW1Q8N136 415 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 PPP1R13LQ8WUF5 828 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 BAP1Q92560 729 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 TUBB2BQ9BVA1 445 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 PRO3102Q9H379 93 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 ANKEF1Q9NU02 776 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 TRIM10Q9UDY6 481 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 CDH23Q9H251 3354 aa18.07■□□□□ 0.48
CHMP1A-204ENST00000547687 LOC102724159A0A0B4J2E5 919 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 STBD1O95210 358 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 GGPS1O95749 300 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 RPL13P26373 211 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 CST5P28325 142 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 SNX17Q15036 470 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 PWP2Q15269 919 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 DUSP28Q4G0W2 176 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 PDXDC1Q6P996 788 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 JAKMIP2Q96AA8 810 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 NAPGQ99747 312 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 ARMCX3Q9UH62 379 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 DKC1O60832 514 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 NR3C1P04150 777 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 PLEKP08567 350 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 NMT1P30419 496 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 KCNH2Q12809 1159 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 ODR4Q5SWX8 454 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 PCSK9Q8NBP7 692 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 FIZ1Q96SL8 496 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 CCDC94Q9BW85 323 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 LSM14BQ9BX40 385 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 CEP72Q9P209 647 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 SEL1LQ9UBV2 794 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
CHMP1A-204ENST00000547687 GSTTP1A0A1W2PQM5 241 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 KRT86O43790 486 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 PRKCEQ02156 737 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 KCNA1Q09470 495 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 SPA17Q15506 151 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 KCNV1Q6PIU1 500 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 METTL7BQ6UX53 244 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 OTUD6AQ7L8S5 288 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 GLT1D1Q96MS3 346 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 ARID3AQ99856 593 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 GDF15Q99988 308 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 MLXIPQ9HAP2 919 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 TFR2Q9UP52 801 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 IGSF9BQ9UPX0 1349 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 TRIM43BA6NCK2 446 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 NOL4O94818 638 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 TXNP10599 105 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 EIF4A3P38919 411 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 CYP27A1Q02318 531 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 OR6J1Q8NGC5 347 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 TRIM43Q96BQ3 446 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 CEP170P1Q96L14 293 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 NUCKS1Q9H1E3 243 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 ZNF302Q9NR11 478 aa18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 MAFBQ9Y5Q3 323 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-204ENST00000547687 ARID2Q68CP9 1835 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 CLIC2O15247 247 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 ATP4AP20648 1035 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms