RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 NPEPPSP55786 919 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 ADAM15Q13444 863 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 MCM6Q14566 821 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 SV2BQ7L1I2 683 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 CNNM3Q8NE01 707 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 GPT2Q8TD30 523 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 PRRX2Q99811 253 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 NIFKQ9BYG3 293 aaKnown RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 AGO3Q9H9G7 860 aaKnown RBP13.37□□□□□ -0.27
HDAC7-226ENST00000547259 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 DACT1Q9NYF0 836 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 PCDHB7Q9Y5E2 793 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
HDAC7-226ENST00000547259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-226ENST00000547259 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
HDAC7-226ENST00000547259 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 IRS1P35568 1242 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-226ENST00000547259 TRAPPC12Q8WVT3 735 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 ALG13Q9NP73 1137 aaKnown RBP13.36□□□□□ -0.27
HDAC7-226ENST00000547259 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-226ENST00000547259 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
HDAC7-226ENST00000547259 GPR182O15218 404 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 SRGAP2BP0DMP2 458 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 RFC5P40937 340 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 AFMP43652 599 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 COASYQ13057 564 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 CRIPAKQ8N1N5 446 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 SPPL3Q8TCT6 385 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 STAMQ92783 540 aa13.35□□□□□ -0.27
HDAC7-226ENST00000547259 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 MRPL42Q9Y6G3 142 aaKnown RBP13.35□□□□□ -0.27
HDAC7-226ENST00000547259 WDFY4Q6ZS81 3184 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 DGAT1O75907 488 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 ITGB1P05556 798 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 AMPD3Q01432 767 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
HDAC7-226ENST00000547259 EMC2Q15006 297 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
HDAC7-226ENST00000547259 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
HDAC7-226ENST00000547259 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 SLC24A5Q71RS6 500 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 RTN4RL1Q86UN2 441 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-226ENST00000547259 RNF135Q8IUD6 432 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 GRAMD1CQ8IYS0 662 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 MICAL1Q8TDZ2 1067 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 EDAQ92838 391 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 ATP6V0A4Q9HBG4 840 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 PUF60Q9UHX1 559 aaKnown RBP13.34□□□□□ -0.27
HDAC7-226ENST00000547259 TECTAO75443 2155 aa13.34□□□□□ -0.27
HDAC7-226ENST00000547259 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 TBX10O75333 385 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-226ENST00000547259 C22orf31O95567 290 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 CYP11B2P19099 503 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 KLRC1P26715 233 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 DLX2Q07687 328 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-226ENST00000547259 RAD51AP2Q09MP3 1159 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 CLUL1Q15846 466 aa13.33□□□□□ -0.28
HDAC7-226ENST00000547259 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
HDAC7-226ENST00000547259 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms