RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 EHHADHQ08426 723 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 AMHR2Q16671 573 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 GPT2Q8TD30 523 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 TMX1Q9H3N1 280 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 CHST12Q9NRB3 414 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 AGPAT5Q9NUQ2 364 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 EXOC1Q9NV70 894 aa25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 PIN4Q9Y237 131 aaKnown RBP25.5■■□□□ 1.67
SMARCD1-203ENST00000547247 ACKR2O00590 384 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 TSPAN1O60635 241 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 EFCAB14O75071 495 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 BAIAP3O94812 1187 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 MBD3O95983 291 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 AXLP30530 894 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 STRN3Q13033 797 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 KMT5BQ4FZB7 885 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 FAM26FQ5R3K3 315 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 TAS1R3Q7RTX0 852 aa25.49■■□□□ 1.67
SMARCD1-203ENST00000547247 SMC2O95347 1197 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 GCNT3O95395 438 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 GTF2BQ00403 316 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 PRPF4BQ13523 1007 aaKnown RBP25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 HPS3Q969F9 1004 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 ADAM2Q99965 735 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 PCDHB13Q9Y5F0 798 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 B4GALT5O43286 388 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 HOXA11P31270 313 aaPredicted RBP25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 ALCAMQ13740 583 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 ZC2HC1CQ53FD0 456 aaPredicted RBP25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 HERVK_113Q902F9 699 aa25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 MTIF3Q9H2K0 278 aaKnown RBP25.48■■□□□ 1.67
SMARCD1-203ENST00000547247 MGEA5O60502 916 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 ARF4P18085 180 aaPredicted RBP25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 PSMD2Q13200 908 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 DSC3Q14574 896 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 KCNB1Q14721 858 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 CAMK4Q16566 473 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 TMEM132AQ24JP5 1023 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 STXBP4Q6ZWJ1 553 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 RTN4RL1Q86UN2 441 aaPredicted RBP25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 SMARCE1Q969G3 411 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 CPB2Q96IY4 423 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 STRA6Q9BX79 667 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 TSPYL2Q9H2G4 693 aaPredicted RBP25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 TBX20Q9UMR3 447 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 PCDHA5Q9Y5H7 936 aa25.47■■□□□ 1.67
SMARCD1-203ENST00000547247 CNTNAP2Q9UHC6 1331 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 ZBBXA8MT70 800 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 ENPP3O14638 875 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 PPP1R37O75864 691 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 RHOBTB3O94955 611 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 EDN1P05305 212 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 PTMSP20962 102 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 C9orf50Q5SZB4 431 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 TWF2Q6IBS0 349 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 NOTUMQ6P988 496 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 SPATA20Q8TB22 786 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 ERCC4Q92889 916 aaPredicted RBP25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 HVCN1Q96D96 273 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 GSDMAQ96QA5 445 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 MRPL4Q9BYD3 311 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 CLSTN2Q9H4D0 955 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 RGS18Q9NS28 235 aa25.46■■□□□ 1.67
SMARCD1-203ENST00000547247 MYBP10242 640 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 CASP5P51878 434 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 SHHQ15465 462 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 NT5DC1Q5TFE4 455 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 TDHQ8IZJ6 230 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 LINC01599Q8WXQ3 324 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 FGFBP2Q9BYJ0 223 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 SLC39A2Q9NP94 309 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 RMND1Q9NWS8 449 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 USP20Q9Y2K6 914 aa25.45■■□□□ 1.66
SMARCD1-203ENST00000547247 A0A1B0GUA9 196 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 TTLL13PA6NNM8 815 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 KCNJ6P48051 423 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 WDR5P61964 334 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 MAP4K3Q8IVH8 894 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 CCDC51Q96ER9 411 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 NUP62CLQ9H1M0 184 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 C1orf112Q9NSG2 853 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 MICAL3Q7RTP6 2002 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 A0A1W2PPC1 479 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 STK4Q13043 487 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 L1TD1Q5T7N2 865 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 ATF7IP2Q5U623 682 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 SLC24A5Q71RS6 500 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 GLIS3Q8NEA6 775 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 BICD1Q96G01 975 aa25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 RNPC3Q96LT9 517 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 ACO2Q99798 780 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 TARS2Q9BW92 718 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 CXXC1Q9P0U4 656 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-203ENST00000547247 N4BP3O15049 544 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 EIF3DO15371 548 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 SARSP49591 514 aaKnown RBP25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 RASIP1Q5U651 963 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 ZPBP2Q6X784 338 aa25.43■■□□□ 1.66
SMARCD1-203ENST00000547247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms