RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
CCDC38-205ENST00000546947 MYH11P35749 1972 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 E9PMD0 336 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 SLC26A4O43511 780 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 OFD1O75665 1012 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
CCDC38-205ENST00000546947 DNAJB1P25685 340 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 TFF2Q03403 129 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 SF3A1Q15459 793 aaKnown RBP16.35■□□□□ 0.21
CCDC38-205ENST00000546947 FAM187BQ17R55 369 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 PPP2R3CQ969Q6 453 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 IFT74Q96LB3 600 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 UBN1Q9NPG3 1134 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 LZTS1Q9Y250 596 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
CCDC38-205ENST00000546947 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 RESTQ13127 1097 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 COL19A1Q14993 1142 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 LONRF3Q496Y0 759 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 NOMO2Q5JPE7 1267 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 PDE12Q6L8Q7 609 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 AGMOQ6ZNB7 445 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 DEPTORQ8TB45 409 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 URGCPQ8TCY9 931 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 MRPS27Q92552 414 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 FZD8Q9H461 694 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 RSAD1Q9HA92 442 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 PUF60Q9UHX1 559 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 IPPQ9Y573 584 aa16.34■□□□□ 0.21
CCDC38-205ENST00000546947 TDRD15B5MCY1 1934 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 TCF20Q9UGU0 1960 aaKnown RBP16.34■□□□□ 0.21
CCDC38-205ENST00000546947 ITGA4P13612 1032 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 LONP1P36776 959 aaKnown RBP16.33■□□□□ 0.2
CCDC38-205ENST00000546947 KRT17Q04695 432 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 MAPK6Q16659 721 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 SLC27A1Q6PCB7 646 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 KCNK18Q7Z418 384 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 CABP7Q86V35 215 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 HACE1Q8IYU2 909 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.2
CCDC38-205ENST00000546947 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 TIPINQ9BVW5 301 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 EIF2AQ9BY44 585 aaKnown RBP16.33■□□□□ 0.2
CCDC38-205ENST00000546947 TRIM6Q9C030 488 aaPredicted RBP16.33■□□□□ 0.2
CCDC38-205ENST00000546947 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
CCDC38-205ENST00000546947 TLR9Q9NR96 1032 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 TBC1D13Q9NVG8 400 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 SPG21Q9NZD8 308 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 INPP5FQ9Y2H2 1132 aa16.33■□□□□ 0.2
CCDC38-205ENST00000546947 A0A1B0GUA9 196 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 B4GALT5O43286 388 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 STX6O43752 255 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 CSPG5O95196 566 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 BMP1P13497 986 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 IRS1P35568 1242 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
CCDC38-205ENST00000546947 EFNA5P52803 228 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 BCAR1P56945 870 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 RNASELQ05823 741 aaKnown RBP16.32■□□□□ 0.2
CCDC38-205ENST00000546947 HYAL1Q12794 435 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
CCDC38-205ENST00000546947 LEXMQ3ZCV2 418 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 TMEM119Q4V9L6 283 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 C1orf186Q6ZWK4 172 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 SLC39A11Q8N1S5 342 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
CCDC38-205ENST00000546947 DRC1Q96MC2 740 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 MTMR6Q9Y217 621 aa16.32■□□□□ 0.2
CCDC38-205ENST00000546947 ZMYM2Q9UBW7 1377 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 FSCN2O14926 492 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 N4BP3O15049 544 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC38-205ENST00000546947 PRKCBP05771 671 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 KCNA5P22460 613 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 GUCY2CP25092 1073 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 PBX3P40426 434 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 UBA7P41226 1012 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 KCNQ1P51787 676 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 PRPF4BQ13523 1007 aaKnown RBP16.31■□□□□ 0.2
CCDC38-205ENST00000546947 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 ADGRD2Q7Z7M1 963 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 MICAL1Q8TDZ2 1067 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 RUSC1Q9BVN2 902 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 C17orf75Q9HAS0 396 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 CLDND1Q9NY35 253 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 KCND2Q9NZV8 630 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 GIT1Q9Y2X7 761 aa16.31■□□□□ 0.2
CCDC38-205ENST00000546947 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms