RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 EXTL1Q92935 676 aa7.92□□□□□ -1.14
CPNE8-204ENST00000546603 VPS11Q9H270 941 aa7.92□□□□□ -1.14
CPNE8-204ENST00000546603 EVLQ9UI08 416 aaPredicted RBP7.92□□□□□ -1.14
CPNE8-204ENST00000546603 LGALS4P56470 323 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 FOXE3Q13461 319 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 ELAVL1Q15717 326 aaKnown RBP7.91□□□□□ -1.14
CPNE8-204ENST00000546603 EAF2Q96CJ1 260 aaPredicted RBP7.91□□□□□ -1.14
CPNE8-204ENST00000546603 RAX2Q96IS3 184 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
CPNE8-204ENST00000546603 ZNF512Q96ME7 567 aaPredicted RBP7.91□□□□□ -1.14
CPNE8-204ENST00000546603 ZNF747Q9BV97 191 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 KRTAP4-2Q9BYR5 136 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 KCTD10Q9H3F6 313 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 CDY2AQ9Y6F7 541 aa7.91□□□□□ -1.14
CPNE8-204ENST00000546603 KRTAP23-1A1A580 65 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 PLSCR1O15162 318 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 MFAP3LO75121 409 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 LPLP06858 475 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 ENPP1P22413 925 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 WNT3AP56704 352 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 TMPRSS15P98073 1019 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 MEF2AQ02078 507 aaPredicted RBP7.9□□□□□ -1.14
CPNE8-204ENST00000546603 CRIP3Q6Q6R5 217 aa7.9□□□□□ -1.14
CPNE8-204ENST00000546603 HECAQ9UBI9 543 aaPredicted RBP7.9□□□□□ -1.14
CPNE8-204ENST00000546603 GOLGA8AA7E2F4 631 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 IPO13O94829 963 aaKnown RBP7.89□□□□□ -1.15
CPNE8-204ENST00000546603 LTA4HP09960 611 aaKnown RBP7.89□□□□□ -1.15
CPNE8-204ENST00000546603 TACR2P21452 398 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 CRHR2Q13324 411 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 UBE3CQ15386 1083 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPNE8-204ENST00000546603 OR5M3Q8NGP4 307 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 WDR66Q8TBY9 1149 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 PRDM12Q9H4Q4 367 aa7.89□□□□□ -1.15
CPNE8-204ENST00000546603 GPR39O43194 453 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 C6P13671 934 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 DUSP2Q05923 314 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 CNGB1Q14028 1251 aaPredicted RBP7.88□□□□□ -1.15
CPNE8-204ENST00000546603 C19orf54Q5BKX5 351 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 MIIPQ5JXC2 388 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 RNF219Q5W0B1 726 aaPredicted RBP7.88□□□□□ -1.15
CPNE8-204ENST00000546603 SPATS2Q86XZ4 545 aaKnown RBP7.88□□□□□ -1.15
CPNE8-204ENST00000546603 ZNF503Q96F45 646 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 ENKD1Q9H0I2 346 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 ZNF703Q9H7S9 590 aaPredicted RBP7.88□□□□□ -1.15
CPNE8-204ENST00000546603 SPC25Q9HBM1 224 aa7.88□□□□□ -1.15
CPNE8-204ENST00000546603 HOXA3O43365 443 aaPredicted RBP7.87□□□□□ -1.15
CPNE8-204ENST00000546603 GNAT2P19087 354 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 RRP1BQ14684 758 aaKnown RBP7.87□□□□□ -1.15
CPNE8-204ENST00000546603 ZNF662Q6ZS27 426 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
CPNE8-204ENST00000546603 TMPRSS6Q8IU80 811 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 ELOA2Q8IYF1 753 aaPredicted RBP7.87□□□□□ -1.15
CPNE8-204ENST00000546603 MSL3Q8N5Y2 521 aaKnown RBP7.87□□□□□ -1.15
CPNE8-204ENST00000546603 ATL2Q8NHH9 583 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 ZNF341Q9BYN7 854 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 EPC1Q9H2F5 836 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
CPNE8-204ENST00000546603 CADPSQ9ULU8 1353 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 DNAJC6O75061 913 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 MTHFD2P13995 350 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 GYPEP15421 78 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 CASRP41180 1078 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 MAN2A2P49641 1150 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 SCAND1P57086 179 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 MRPS9P82933 396 aaKnown RBP7.86□□□□□ -1.15
CPNE8-204ENST00000546603 MDGA1Q8NFP4 955 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 ST8SIA2Q92186 375 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 AHCYL2Q96HN2 611 aaKnown RBP7.86□□□□□ -1.15
CPNE8-204ENST00000546603 PLEKHG4BQ96PX9 1271 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 CSRNP2Q9H175 543 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 VTA1Q9NP79 307 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 PARPBPQ9NWS1 579 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 DPP7Q9UHL4 492 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 EDARQ9UNE0 448 aa7.86□□□□□ -1.15
CPNE8-204ENST00000546603 GOLGA6L6A8MZA4 724 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 PRAMEF4O60810 478 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 FZD7O75084 574 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 GZMKP49863 264 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 SCNN1GP51170 649 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 PTH1RQ03431 593 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 RNF187Q5TA31 235 aaPredicted RBP7.85□□□□□ -1.15
CPNE8-204ENST00000546603 Q6ZRM9 215 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 LHFPL2Q6ZUX7 228 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 USP51Q70EK9 711 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 SNX33Q8WV41 574 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 ATXN2LQ8WWM7 1075 aaKnown RBP7.85□□□□□ -1.15
CPNE8-204ENST00000546603 AUTS2Q8WXX7 1259 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 IL17RAQ96F46 866 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 ORAI2Q96SN7 254 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 GPR87Q9BY21 358 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 MCM8Q9UJA3 840 aa7.85□□□□□ -1.15
CPNE8-204ENST00000546603 STC2O76061 302 aa7.84□□□□□ -1.15
CPNE8-204ENST00000546603 MRPL49Q13405 166 aaKnown RBP7.84□□□□□ -1.15
CPNE8-204ENST00000546603 CMIPQ8IY22 773 aa7.84□□□□□ -1.15
CPNE8-204ENST00000546603 PDCD2LQ9BRP1 358 aa7.84□□□□□ -1.15
CPNE8-204ENST00000546603 C14orf119Q9NWQ9 140 aa7.84□□□□□ -1.15
CPNE8-204ENST00000546603 XDHP47989 1333 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms