RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CDC42EP4Q9H3Q1 356 aaKnown RBP15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 FRMPD4Q14CM0 1322 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 LIN7AO14910 233 aaPredicted RBP15.27■□□□□ 0.04
SRP54-202ENST00000546080 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 LUC7L3O95232 432 aaKnown RBP15.27■□□□□ 0.04
SRP54-202ENST00000546080 AKR1B1P15121 316 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 COILP38432 576 aaPredicted RBP15.27■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD20A2Q5SQ80 823 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD20A1Q5TYW2 823 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD20A3Q5VUR7 823 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 CDCA2Q69YH5 1023 aaPredicted RBP15.27■□□□□ 0.04
SRP54-202ENST00000546080 VSTM1Q6UX27 236 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 ASRGL1Q7L266 308 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 FITM2Q8N6M3 262 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 GDAP1Q8TB36 358 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 CKAP2Q8WWK9 683 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 SETDB2Q96T68 719 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.04
SRP54-202ENST00000546080 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 MLXIPLQ9NP71 852 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 ADAM22Q9P0K1 906 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 APEX2Q9UBZ4 518 aa15.27■□□□□ 0.04
SRP54-202ENST00000546080 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 ACSL3O95573 720 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 TTLL1O95922 423 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CREB1P16220 341 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CYP3A7P24462 503 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 PEX19P40855 299 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 SPIRE1Q08AE8 756 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 ZDHHC14Q8IZN3 488 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 RUSC1Q9BVN2 902 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 BHMT2Q9H2M3 363 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 TRIM33Q9UPN9 1127 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 WNK3Q9BYP7 1800 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 LRRN2O75325 713 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 RHBDL3P58872 404 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 MKRN3Q13064 507 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 RRP1BQ14684 758 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 DDB1Q16531 1140 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CYP1B1Q16678 543 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 PRR16Q569H4 304 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 ETNPPLQ8TBG4 499 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 MBOAT7Q96N66 472 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 RAB3IPQ96QF0 476 aaPredicted RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 AGPAT1Q99943 283 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 BCAS3Q9H6U6 928 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
SRP54-202ENST00000546080 KLHL14Q9P2G3 628 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 PRKAG3Q9UGI9 489 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 SPATA31A1Q5TZJ5 1347 aa15.26■□□□□ 0.03
SRP54-202ENST00000546080 IGKV6D-41A0A0C4DH26 115 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 HGSO14964 777 aaPredicted RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRP54-202ENST00000546080 WFS1O76024 890 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 ECEL1O95672 775 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 COMTP21964 271 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 PDE6BP35913 854 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 SKIV2L2P42285 1042 aaKnown RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 MYL7Q01449 175 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 MESDQ14696 234 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 KIF22Q14807 665 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 KCTD1Q719H9 257 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 SLC51AQ86UW1 340 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 ZNF483Q8TF39 744 aaPredicted RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 RMDN2Q96LZ7 410 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 RPS6KC1Q96S38 1066 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 IKZF4Q9H2S9 585 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 CORO1CQ9ULV4 474 aaPredicted RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 STK24Q9Y6E0 443 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 ZMYM2Q9UBW7 1377 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 FTLP02792 175 aaPredicted RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 CCNB1P14635 433 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 GAP43P17677 238 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 STX2P32856 288 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 KCNJ1P48048 391 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 CCNG1P51959 295 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 GPC5P78333 572 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 ICA1Q05084 483 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 BLMHQ13867 455 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 TAF11Q15544 211 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms