RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 CREB1P16220 341 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 VCAM1P19320 739 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 JAM2P57087 298 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 SNX29Q8TEQ0 813 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 KIFAP3Q92845 792 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 ART4Q93070 314 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 C18orf8Q96DM3 657 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 DLGAP2Q9P1A6 1054 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 CTTNBP2NLQ9P2B4 639 aa17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 ARPP21Q9UBL0 812 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-203ENST00000546079 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 PALM3A6NDB9 673 aaPredicted RBP17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 KRT13P13646 458 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 SETDB1Q15047 1291 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 FRMD5Q7Z6J6 570 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 NELFCDQ8IXH7 590 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 SLC30A5Q8TAD4 765 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 NUDT12Q9BQG2 462 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 BMP2KQ9NSY1 1161 aaPredicted RBP17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 PFASO15067 1338 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 MAST2Q6P0Q8 1798 aa17.79■□□□□ 0.44
CLPTM1-203ENST00000546079 LMNAP02545 664 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 HIBADHP31937 336 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 RFC5P40937 340 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 TFAP4Q01664 338 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 LONRF1Q17RB8 773 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 INTS8Q75QN2 995 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 OTUD6AQ7L8S5 288 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 TXNRD3Q86VQ6 643 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 VSIG1Q86XK7 387 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 SCFD1Q8WVM8 642 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 NSUN4Q96CB9 384 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 KCNK9Q9NPC2 374 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 MYBL1P10243 752 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 ALAS1P13196 640 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 YARSP54577 528 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 DYNC1I2Q13409 638 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 MPP2Q14168 576 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 RNF220Q5VTB9 566 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 PRELID2Q8N945 189 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 ANKRD42Q8N9B4 389 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 DDX23Q9BUQ8 820 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 CRNKL1Q9BZJ0 848 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 MYLK2Q9H1R3 596 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 DCLRE1BQ9H816 532 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 USP20Q9Y2K6 914 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
CLPTM1-203ENST00000546079 POTEMA6NI47 508 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 CYP2D6P10635 497 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 CTNNA2P26232 953 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 STX2P32856 288 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 POLGP54098 1239 aaPredicted RBP17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 ZNF211Q13398 564 aaPredicted RBP17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 ARHGEF18Q6ZSZ5 1173 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 CYFIP1Q7L576 1253 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 SDCCAG8Q86SQ7 713 aaPredicted RBP17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 GDAP1Q8TB36 358 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 FAM81AQ8TBF8 368 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 FBXO41Q8TF61 875 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 ALG3Q92685 438 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 DTNBP1Q96EV8 351 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 RBM41Q96IZ5 413 aaKnown RBP17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 ZNF333Q96JL9 665 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 CRAMP1Q96RY5 1269 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 EMILIN3Q9NT22 766 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 SCOCQ9UIL1 159 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 LRCH1Q9Y2L9 728 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
CLPTM1-203ENST00000546079 HGSO14964 777 aaPredicted RBP17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 ADRA2BP18089 450 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 MUM1Q2TAK8 710 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 SPZ1Q9BXG8 430 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 TBC1D10AQ9BXI6 508 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 PITPNM3Q9BZ71 974 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 MLXIPLQ9NP71 852 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.43
CLPTM1-203ENST00000546079 TRAFD1O14545 582 aaPredicted RBP17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 GH1P01241 217 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 BRAFP15056 766 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 PLCG2P16885 1265 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 LMNB1P20700 586 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 RASSF2P50749 326 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 MECOMQ03112 1051 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 RNASELQ05823 741 aaKnown RBP17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 RRP1BQ14684 758 aaKnown RBP17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 EPHA7Q15375 998 aa17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 LNX1Q8TBB1 728 aaPredicted RBP17.76■□□□□ 0.43
CLPTM1-203ENST00000546079 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms