RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 SLC9A2Q9UBY0 812 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 STAT3P40763 770 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 MXD4Q14582 209 aaPredicted RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 SMYD3Q9H7B4 428 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 EML4Q9HC35 981 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 OVOS2A0A0G2JMS6 1433 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 USP11P51784 963 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 DUOXA2Q1HG44 320 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 SP110Q9HB58 689 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 ALKQ9UM73 1620 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.42
CIT-217ENST00000545913 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 ESRRBO95718 433 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 PMS2P54278 862 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 TMEM259Q4ZIN3 620 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 ZBTB41Q5SVQ8 909 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 RHOT1Q8IXI2 618 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 LXNQ9BS40 222 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 G3BP2Q9UN86 482 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 NEMP1O14524 444 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 LCA5Q86VQ0 697 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 KDM4CQ9H3R0 1056 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 ABCA6Q8N139 1617 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 USP17L10C9JJH3 530 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 DIAPH2O60879 1101 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 MAGOHP61326 146 aaKnown RBP12.43□□□□□ -0.42
CIT-217ENST00000545913 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 BTBD6Q96KE9 485 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 POTECB2RU33 542 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 TMED1Q13445 227 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
CIT-217ENST00000545913 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 ECE2O60344 883 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 PPP2R2AP63151 447 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 ADGRF4Q8IZF3 695 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 STOML1Q9UBI4 398 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 AP3B1O00203 1094 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 P4HBP07237 508 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 DHX34Q14147 1143 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 POTEGQ6S5H5 508 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 HERC5Q9UII4 1024 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 MADDQ8WXG6 1647 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 TRIM49BA6NDI0 452 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 DRAP1Q14919 205 aaPredicted RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 ALX1Q15699 326 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 TXNRD1Q16881 649 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 EFHBQ8N7U6 833 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 TGS1Q96RS0 853 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 NARFQ9UHQ1 456 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 M0QYV0 167 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 PRAMEP78395 509 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 PTK2BQ14289 1009 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 HLFQ16534 295 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 TBC1D10CQ8IV04 446 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 TIPINQ9BVW5 301 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 SLC16A4O15374 487 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 PDXDC1Q6P996 788 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 HEMGNQ9BXL5 484 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 INPP5FQ9Y2H2 1132 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 SNX24Q9Y343 169 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 KITP10721 976 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 FCER1AP12319 257 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms